Gene Information

Name : STBHUCCB_29550 (STBHUCCB_29550)
Accession : YP_005218455.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2873900 - 2876467 bp
Length : 2568 bp
Strand : +
Note : similar to DNA mismatch repair protein MutS PRK05399; similar to MutS of Gammaproteobacteria UniRef RepID=D4GLF3_PANAM

DNA sequence :
ATGAATGAGTCATTTGATAAGGACTTCTCCAACCACACCCCCATGATGCAGCAGTATCTCAAGCTGAAAGCCCAGCATCC
GGAGATCCTGCTCTTTTATCGTATGGGAGACTTTTACGAGCTGTTTTATGACGACGCAAAGCGTGCGTCGCAGTTGCTCG
ATATTTCGCTGACCAAACGCGGCGCATCGGCTGGCGAACCTATCCCTATGGCGGGTATCCCGCACCACGCCGTAGAAAAC
TACCTCGCGAAACTGGTCAATCAGGGCGAATCCGTCGCTATTTGCGAACAGATTGGCGATCCGGCCACCAGCAAAGGTCC
CGTTGAACGTAAAGTCGTGCGTATCGTTACGCCTGGCACCATCAGCGATGAAGCCCTGTTACAGGAGCGTCAGGATAACC
TGCTGGCGGCTATCTGGCAGGATGGTAAAGGCTACGGTTACGCCACGCTGGATATCAGCTCCGGGCGCTTTCGTCTGAGC
GAACCCGCCGACCGTGAAACGATGGCCGCAGAGCTGCAGCGCACCAATCCCGCCGAACTGTTGTATGCCGAAGATTTTGC
TGAAATGGCGTTAATAGAGGGACGCCGGGGTCTGCGCCGTCGCCCGTTGTGGGAGTTTGAGATTGATACCGCCCGCCAGC
AGTTAAATCTGCAATTCGGTACGCGGGATCTGGTCGGTTTCGGCGTCGAAAATGCCTCGCGTGGATTATGTGCGGCAGGC
TGCCTGTTACAGTACGTAAAAGATACCCAGCGCACCTCCCTGCCGCATATTCGTTCCATTACGATGGAACGCCAGCAGGA
CAGCATCATTATGGATGCCGCGACCCGCCGCAATCTGGAAATTACCCAGAACCTGGCCGGCGGTGTCGAAAATACCCTCG
CCGCGGTGCTTGACTGTACCGTGACGCCAATGGGTAGCCGAATGCTTAAACGCTGGCTGCATATGCCGGTACGAAATACC
GACATATTACGTGAACGCCAGCAGACCATCGGCGCCTTGCAGGATACCGTCAGCGAACTGCAACCGGTGCTGCGTCAGGT
CGGCGATCTGGAGCGCATCCTTGCGCGTCTGGCGCTGCGCACCGCGCGTCCGCGCGATCTCGCCCGAATGCGTCACGCCT
TCCAGCAGCTGCCGGAATTGCACGCTCAGCTTGAAACCGTTGACAGCGCGCCGGTACAGGCGTTGCGTAAAAAAATGGGC
GATTTCGCCGAACTGCGCGACCTCCTGGAGCGCGCCATTATTGACGCGCCGCCGGTACTGGTCCGCGACGGCGGCGTTAT
TGCGCCCGGCTACCATGAAGAGCTGGATGAATGGCGCGCGCTGGCGGACGGCGCCACCGATTATCTCGATCGTCTGGAAA
TTCGCGAACGCGAGCGTACCGGGCTGGATACGCTGAAAGTCGGCTATAACGCGGTACATGGTTATTACATTCAGATTAGC
CGTGGTCAAAGCCATCTGGCGCCCATCAATTATGTGCGTCGCCAGACGCTGAAAAATGCCGAACGCTACATTATTCCTGA
GCTTAAAGAGTACGAAGATAAAGTTCTGACCTCGAAAGGCAAAGCACTGGCGCTGGAAAAACAGCTATATGACGAATTGT
TTGATCTGCTGTTGCCGCATCTGGCCGATTTACAGCAGAGCGCCAACGCTCTGGCGGAGCTGGATGTGCTGGTTAACCTG
GCCGAACGCGCCTGGACGCTGAATTACACCTGCCCAACATTTACCGATAAACCCGGTATCCGTATTACCGAAGGTCGCCA
CCCGGTGGTTGAACAGGTACTGAATGAGCCGTTTATCGCTAACCCGCTCAATCTGTCGCCGCAGCGCCGGATGTTGATCA
TTACCGGCCCCAATATGGGCGGTAAAAGTACCTATATGCGACAAACGGCATTGATCGCCCTGCTGGCCTATATCGGCAGT
TACGTTCCGGCGCAAAACGTGGAAATCGGCCCCATCGACCGTATTTTTACCCGCGTCGGCGCAGCGGACGACCTGGCTTC
CGGGCGTTCGACCTTTATGGTGGAGATGACCGAAACCGCGAACATTCTGCATAATGCGACGGAAAACAGTCTGGTATTGA
TGGATGAAATCGGGCGCGGTACCTCCACGTATGACGGGCTGTCATTGGCCTGGGCCTGCGCGGAGAATCTCGCGAATAAG
ATTAAAGCGTTAACGCTGTTCGCTACCCACTACTTCGAGCTGACCCAATTACCGGAGAAAATGGAAGGCGTGGCGAACGT
CCACCTGGATGCGCTGGAACACGGCGATACTATCGCGTTTATGCACAGCGTGCAGGACGGCGCGGCAAGTAAGAGCTATG
GCCTGGCGGTCGCGGCGCTTGCGGGCGTCCCTAAAGAAGTCATCAAACGCGCGCGCCAAAAACTCCGCGAGCTGGAAAGC
ATCTCGCCCAATGCGGCGGCAACGCAGGTGGACGGCACGCAAATGTCGTTGCTTGCCGCCCCGGAGGAGACATCGCCCGC
CGTTGAAGCGCTGGAGAATCTCGATCCGGACTCCCTGACGCCACGCCAGGCGCTGGAGTGGATCTATCGGCTGAAAAGTC
TGGTGTAA

Protein sequence :
MNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVEN
YLAKLVNQGESVAICEQIGDPATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATLDISSGRFRLS
EPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAG
CLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNT
DILRERQQTIGALQDTVSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMG
DFAELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLDRLEIRERERTGLDTLKVGYNAVHGYYIQIS
RGQSHLAPINYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANALAELDVLVNL
AERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGS
YVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRGTSTYDGLSLAWACAENLANK
IKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
ISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29550 YP_005218455.1 hypothetical protein VFG0562 Protein 0.0 100