Gene Information

Name : STBHUCCB_29440 (STBHUCCB_29440)
Accession : YP_005218444.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2866753 - 2868297 bp
Length : 1545 bp
Strand : -
Note : similar to Protein invG of Proteobacteria UniRef RepID=INVG_SALTY

DNA sequence :
ATGGCGCTACAGCTAAAGGAGCCTGTCATTGTTAGCAAAATGGCGGCACGAAAAAAAATTACGGGCAACTTTGAGTTTCA
CGATCCTAACGCATTACTGGAGAAGCTTTCCCTACAACTGGGGCTGATTTGGTATTTCGATGGGCAGGCTATCTATATTT
ATGACGCCAGTGAAATGCGCAATGCCGTGGTTTCTTTACGCAACGTCTCACTCAATGAGTTCAACAATTTTCTAAAACGC
TCAGGTTTATATAACAAAAATTACCCGCTACGTGGCGATAACCGTAAAGGAACATTCTATGTTTCAGGGCCACCCGTCTA
TGTTGATATGGTGGTCAACGCCGCCACCATGATGGACAAGCAAAACGATGGTATTGAGCTGGGACGCCAGAAAATAGGGG
TGATGCGTCTGAACAATACCTTCGTGGGCGATCGTACCTACAATCTGCGCGATCAGAAAATGGTTATTCCCGGTATTGCT
ACGGCCATTGAAAGGTTATTGCAGGGAGAAGAGCAACCCTTAGGTAATATTGTCAGTAGCGAACCCCCGGCGATGCCAGC
ATTTTCAGCGAATGGAGAAAAAGGTAAAGCAGCAAATTATGCCGGTGGCATGAGTCTGCAGGAAGCTTTAAAGCAAAATG
CCGCGGCGGGCAATATTAAAATCGTGGCCTATCCGGATACCAACAGTTTGTTAGTAAAGGGAACGGCTGGGCAGGTGCAT
TTTATCGAAATGCTGGTTAAAGCGCTGGATGTCGCCAAACGTCACGTAGAATTATCCCTGTGGATTGTCGATCTTAATAA
AAGCGATCTGGAGCGTTTGGGCACTTCATGGAGCGGCAGCATAACTATTGGGGACAAACTTGGCGTGTCATTAAACCAGT
CTTCAATAAGTACCCTCGATGGCAGTCGATTCATCGCCGCGGTCAATGCGTTAGAAGAGAAGAAACAGGCGACGGTGGTT
TCGCGTCCGGTATTACTGACTCAGGAAAATGTTCCCGCTATTTTTGATAACAACAGAACGTTTTACACCAAGCTGATTGG
GGAACGTAATGTGGCGCTTGAGCATGTAACATACGGAACAATGATCCGAGTGCTGCCCCGTTTTTCCGCAGATGGTCAGA
TAGAAATGTCGCTGGACATTGAAGATGGCAACGATAAGACGCCGCAATCCGATACTACCACCTCCGTAGATGCGTTACCC
GAAGTCGGGCGAACGTTAATTAGCACTATTGCAAGAGTTCCGCACGGAAAAAGTTTGCTGGTCGGTGGTTATACACGGGA
TGCAAATACCGATACTGTCCAAAGTATTCCGGTTTTAGGCAAATTACCGCTTATTGGTAGCCTGTTCCGTTATTCCAGTA
AGAATAAAAGTAATGTTGTTCGTGTGTTCATGATTGAACCAAAAGAAATTGTCGACCCGTTAACGCCGGATGCCAGCGAA
TCGGTAAACAATATTCTGAAGCAAAGCGGTGCCTGGAGTGGGGACGATAAGTTACAGAAATGGGTTCGTGTTTATCTGGA
TAGAGGTCAGGAGGTAATTAAATGA

Protein sequence :
MALQLKEPVIVSKMAARKKITGNFEFHDPNALLEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKR
SGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVVNAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIA
TAIERLLQGEEQPLGNIVSSEPPAMPAFSANGEKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAGQVH
FIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVV
SRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALP
EVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPVLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASE
SVNNILKQSGAWSGDDKLQKWVRVYLDRGQEVIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 0.0 100
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 0.0 100
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 0.0 99
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 0.0 99
ECs3733 NP_311760.1 EivG Not tested LIM Protein 2e-143 56
invG AAS66859.1 InvG Not tested SSR-2 Protein 8e-126 50
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 4e-93 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29440 YP_005218444.1 hypothetical protein VFG0559 Protein 0.0 99
STBHUCCB_29440 YP_005218444.1 hypothetical protein VFG1004 Protein 2e-121 51
STBHUCCB_29440 YP_005218444.1 hypothetical protein VFG2463 Protein 3e-100 43