Gene Information

Name : STBHUCCB_29250 (STBHUCCB_29250)
Accession : YP_005218425.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2848855 - 2849247 bp
Length : 393 bp
Strand : -
Note : similar to Chaperone protein sicP of Salmonella enterica UniRef RepID=SICP_SALPA

DNA sequence :
TTGCAAGCACACCAGGATATTATCGCTAATATTGGTGAGAAATTGGGTTTACCGCTCACTTTTGATGACAACAATCAGTG
CTTATTACTACTCGATAGCGATATTTTTACGTCTATTGAAGCTAAAGATGATATCTGGTTATTGAACGGTATGATTATAC
CGCTATCGCCTGTTTGTGGCGATTCTATCTGGCGGCAGATTATGGTGATTAATGGTGAACTGGCTGCGAATAATGAAGGT
ACGTTAGCGTATATTGATGCCGCAGAGACGTTGTTGTTTATACATGCAATTACCGATCTGACAAATATTTATCATATCAT
ATCGCAGCTTGAGTCATTTGTGAATAAGCAGGAAGCGCTCAAAAACATACTACAGGAATATGCTAAGGTATGA

Protein sequence :
MQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEG
TLAYIDAAETLLFIHAITDLTNIYHIISQLESFVNKQEALKNILQEYAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicP NP_457273.1 chaperone (associated with virulence) Virulence SPI-1 Protein 4e-48 99
sicP NP_806482.1 chaperone Virulence SPI-1 Protein 4e-48 99
sicP YP_217798.1 virulence associated chaperone Virulence SPI-1 Protein 3e-47 98
sicP NP_461800.1 secretion chaperone Virulence SPI-1 Protein 4e-53 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29250 YP_005218425.1 hypothetical protein VFG0541 Protein 1e-53 98