Gene Information

Name : STBHUCCB_29190 (STBHUCCB_29190)
Accession : YP_005218421.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Transcriptional regulator hilD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2843006 - 2843935 bp
Length : 930 bp
Strand : +
Note : similar to Transcriptional regulator hilD of Salmonella enterica UniRef RepID=HILD_SALTY

DNA sequence : 
ATGGAAAATGTAACCTTTGTAAGTAATAGTCATCAGCGTCCTGCCGCAGATAACTTACAGAAATTAAAATCACTTTTGAC
AAATACCCAGCAGCAAATTAAAAGTCAGACTCAGCAGGTTACCATCAAAAATCTTTATGTAAGCAGTTTCACTTTAGTTT
GCTTTCGGAGCGGTAAACTGACGATTAGCAATAATCACGATACGATTTACTGTGACGAACCTGGGATGTTGGTGCTCAAA
AAAGAGCAGGTAGTTAACGTGACGCTTGAAGAGGTCAATGGCCACATGGATTTCGATATACTCGAGATACCGACGCAACG
ACTTGGCGCTCTCTATGCACTTATCCCAAACGAGCAGCAAACCAAAATGGCGGTACCCACAGAGAAAGCGCAGAAAATCT
TCTATACACCTGACTTTCCTGCCAGAAGAGAGGTATTTGAACATCTGAAAACGGCGTTCTCCTGTACGAAGGATACAAGC
AAAGGTTGCAGTAATTGTAACAACAAAAGTTGTATTGAAAATGAAGAGTTAATTCCTTATTTTCTGCTGTTCCTGCTTAC
TGCTTTTCTCCGACTCCCTGAGAGTTATGAGATCATCCTTAGCTCGGCTCAGATAACGTTAAAGAAGCGCGTTTACAACA
TTATATCTTCGTCACCCAGTAGACAGTGGAAGCTTACGGATGTTGCCGATCATATATTTATGAGTACGTCAACGCTCAAA
CGGAAACTTGCAGAAGAAGGTACCAGCTTTAGCGATATCTACTTATCGGCAAGAATGAATCAGGCAGCAAAACTTTTACG
CATAGGCAACCATAATGTTAATGCTGTAGCATTAAAATGTGGTTATGACAGCACGTCCTACTTCATTCAATGTTTCAAAA
AATATTTTAAAACTACGCCATCGACATTCATAAAAATGGCGAACCATTAA

Protein sequence : 
MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQVTIKNLYVSSFTLVCFRSGKLTISNNHDTIYCDEPGMLVLK
KEQVVNVTLEEVNGHMDFDILEIPTQRLGALYALIPNEQQTKMAVPTEKAQKIFYTPDFPARREVFEHLKTAFSCTKDTS
KGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKKRVYNIISSSPSRQWKLTDVADHIFMSTSTLK
RKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY2996 NP_457269.1 AraC-family transcriptional regulator Not tested SPI-1 Protein 1e-127 100
t2777 NP_806478.1 AraC family transcriptional regulator Not tested SPI-1 Protein 1e-127 100
hilD YP_217794.1 regulatory protein Virulence SPI-1 Protein 3e-127 99
hilD NP_461796.1 invasion protein regulatory protein Virulence SPI-1 Protein 6e-128 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29190 YP_005218421.1 Transcriptional regulator hilD VFG0537 Protein 3e-128 99