Gene Information

Name : STBHUCCB_29180 (STBHUCCB_29180)
Accession : YP_005218420.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2841512 - 2842576 bp
Length : 1065 bp
Strand : -
Note : similar to Protein prgH of Salmonella enterica UniRef RepID=PRGH_SALTY

DNA sequence :
GTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGCCAACTCCCTGATATACCTGCCGATAGCTTTTTTATCCCGCTGGA
CCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATGCGACCGAAATTATACTCCATGAGCTGAAAGAAGGAAATC
CTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGAATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCG
TGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGAACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGC
ACTGGCCGGGTTTTTTATATTGGGAATTGGGACGGTGGGGACGTTATGGATACTTAACTCGCCGCAGCGGCAGGCCGCAG
AGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGCTTTCAGGTGTTGCCAGGACGGGACAAAATGCTCTATGTCGCTGCG
CAAAATGAAAGAGATACGCTGTGGGCTCGTCAGGTTTTAGCGAGGGGCGATTATGATAAAAATGCGCGAGTGATTAACGA
AAACGAAGAAAATAAGCGTATCTCTACCTGGCTGGATACCTATTATCCGCAGCTGGCTTATTATCGGCTTCATTTCGATG
AGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACACGATGAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAG
CTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACATTGATGGACGATGTTACCGCCGCAGGCCAGGCGGAAGC
GGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAGGGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCG
ATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTACCGCACATGGGGAGGACGCTATGTGCAGTTTGCG
ATCGAATTAAAAGATGACTGGCTCAAGGGGCGCTCATTTCAGTACGGGGCGGAAGGTTATATCAAAATGAGCCCAGGCCA
TTGGTATTTCCCAAGCCCACTTTAA

Protein sequence :
MVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDATEIILHELKEGNPESRSVQLNTPIQVGELLILIRPESEP
WVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTLWILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAA
QNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYYPQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQK
LRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFA
IELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgH NP_461795.1 needle complex inner membrane protein Virulence SPI-1 Protein 1e-163 99
prgH NP_457268.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 1e-164 99
prgH NP_806477.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-164 99
prgH YP_217793.1 cell invasion protein Virulence SPI-1 Protein 7e-164 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29180 YP_005218420.1 hypothetical protein VFG0536 Protein 5e-164 99