Gene Information

Name : STBHUCCB_29130 (STBHUCCB_29130)
Accession : YP_005218415.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Oxygen-regulated invasion protein orgB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2838967 - 2839638 bp
Length : 672 bp
Strand : -
Note : similar to type III secretion system protein HrpB PRK09098; similar to Oxygen-regulated invasion protein orgB of Salmonella enterica UniRef RepID=ORGB_SALTY

DNA sequence : 
ATGCTCAAAAATATCCCAATTCCGTCCCCGCTTTCGCCTGTTGAGGGGATACTGATAAAGCGTAAAACGCTGGAACGTTA
TTTCTCTATTGAAAGATTAGAACAGCAGGCGCACCAACGGGCTAAGCGTATTTTGCGAGAGGCGGAAGAAGAGGCAAAGA
CCTTGCGGATGTACGCCTATCAGGAAGGTTACGAGCAGGGAATGATAGACGCGTTACAGCAGGTCGCCGCTTATCTTACT
GATAATCAGACAATGGCCTGGAAGTGGATGGAAAAAATACAGATTTATGCCCGCGAGTTATTTTCAGCAGCGGTCGACCA
TCCCGAAACGCTTTTAACCGTCCTGGATGAGTGGCTAAGGGATTTCGATAAGCCGGAGGGGCAACTTTTTTTAACACTGC
CAGTTAATGCGAAAAAAGAACACCAAAAACTGATGGTGTTGCTTATGGAGAACTGGCCTGGCACTTTTAATCTTAAATAT
CATCAGGAACAGCGCTTTATCATGAGTTGCGGCGATCAGATCGCAGAATTTTCACCTGAACAATTTGTTGAAACAGCAGT
AGGCGTCATTAAGCATCATCTTGATGAACTTCCACAAGACTGCCGGACGATTTCTGATAACGCCATTAACGCACTTATTG
ATGAATGGAAGACAAAAACGCAAGCATTGTAA

Protein sequence : 
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT
DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKEHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orgAb NP_457263.1 cell invasion protein Virulence SPI-1 Protein 6e-103 100
orgA NP_806472.1 oxygen-regulated invasion protein Virulence SPI-1 Protein 6e-103 100
orgB NP_461790.1 needle complex export protein Virulence SPI-1 Protein 2e-102 99
orgB YP_217788.1 flagellar biosynthesis/type III secretory pathway protein Not tested SPI-1 Protein 2e-102 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29130 YP_005218415.1 Oxygen-regulated invasion protein orgB VFG0532 Protein 6e-103 99