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Name : STBHUCCB_29100 (STBHUCCB_29100) Accession : YP_005218412.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : Transcriptional regulator sirC Function : - COG functional category : - COG ID : - EC number : - Position : 2837266 - 2838153 bp Length : 888 bp Strand : - Note : similar to DNA-binding transcriptional regulator GadX PRK09978; similar to Transcriptional regulator sirC of Salmonella enterica UniRef RepID=SIRC_SALTI DNA sequence : ATGGTATTGCCTTCAATGAATAAATCAGTTGAGGCCATTAGCAATAATCACCTTCAACAACCGAACAAATTTCCATTAAT AAATGGATTAGCTGACGTAAGAGACTATTATGTCGCAAACTGCTTATTGTTTAAACTTAATAAAGGCAGTTTGCGAATTG AAAACGAATTTGGGGAGTTCATCGAACAATCTGCGCTGTGTTTATTTTTATTGGAAAAAGATCAAACAATCACGCTTAGT ATGAGCGAAATAGAAGGACATATTGATTTTTCTTCACTGGAAGTTTCCTATGACTTAATGCAAAAATTCTACAAAGTTTT TTACAGTACAAGAAACTATAATGATCGAGAGCTATCATTAAAAACGAAACCAAAGTATTTTTTTCATGCGGACTTGTTGC CAGGGATGAGTGATACTTTTGACTCTATTTTGCATGGTGTCGCATGTCCACGGGTTTGTAGTAATGTGAGTATTGATGAT CATGATTATTCATATTTCTCATTGATGTATCTTATATCGGCATTTGTACGTAAGCCCGGTGGGTTTGATTTCCTTGAGCG AGCAATAAAAATTACAACAAAAGAGAAAGTTTATAACATTATTATCAGCGATCTCACCCGCAAATGGTCACAGGCTGAGG TGGCAGGAAAGCTGTTTATGAGCGTATCAAGTCTGAAGCGAAAACTGGCCGCTGAAGAGGTGAGTTTTAGCAAAATATAC TTGGATGCTCGTATGAATCAGGCTATAAAATTATTACGTATGGGTGCTGGAAATATTTCACAAGTCGCGACGATGTGTGG CTATGATACGCCTTCTTATTTTATCGCTATTTTTAAACGGCATTTTAAGATTACACCGCTTAGCTTTATGCGTACAATGA ACCATTGA Protein sequence : MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLFKLNKGSLRIENEFGEFIEQSALCLFLLEKDQTITLS MSEIEGHIDFSSLEVSYDLMQKFYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACPRVCSNVSIDD HDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLAAEEVSFSKIY LDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTMNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sprA | NP_457261.1 | possible AraC-family transcriptional regulator | Virulence | SPI-1 | Protein | 1e-137 | 100 |
| sprA | NP_806470.1 | AraC family transcriptional regulator | Virulence | SPI-1 | Protein | 1e-137 | 100 |
| hilC | NP_461788.1 | invasion regulatory protein | Virulence | SPI-1 | Protein | 2e-136 | 99 |
| hilC | YP_217786.1 | AraC family transcriptional regulator | Not tested | SPI-1 | Protein | 7e-137 | 99 |
| sprA | AAD37784.1 | transcriptional regulator SprA | Virulence | SPI-1 | Protein | 1e-136 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STBHUCCB_29100 | YP_005218412.1 | Transcriptional regulator sirC | VFG0531 | Protein | 7e-137 | 99 |
