Gene Information

Name : STBHUCCB_29090 (STBHUCCB_29090)
Accession : YP_005218411.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : AraC-family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2836126 - 2836881 bp
Length : 756 bp
Strand : -
Note : similar to Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain COG2197; similar to Possible AraC-family transcriptional regulator of Salmonella enterica UniRef RepID=B5BES4_SALPK

DNA sequence :
ATGAGAAATGTAATTATATACGGTATTAACTGGACTAATTGTTATGCCCTACAGTCTATTTTTAAGCAAAAATATCCGGA
AAAGTGCGTTAAAACGTGTAACTCATTAACCGCACTTTTGCATTCTCTATCCGATATGCCGGACGCCGGGCTGATTTTAG
CTTTGAACCCGCATGAGCATGTTTATCTTTTTCATGCGTTGCAGGCGCGGTTGCAGAACCGTAAAGTTTTGGTAGTGGCA
GATCGCTTGTATTATATCGATCGCTGTGTGCTGCAATATTTTGGCGTTATGGATTATGTTTTAAAAGACGAACTATCCTG
CGCTATCCGCTCGGAGCGAGAGAAGCTCCGTCTTCCGGAAGCCTGGCTGCGTTTCTGCCACAGGCCACAAAAGAAAACCG
TGGCTGCTACGTATGCTTTTAATGCCGGCGAGACGCCGGAAGAGGTATTGTTTAATATCAATCAATACGCCTGGTGGAAT
CTACCTCCCGGTGTCACGCAGGCGAAATATGCGCTGCTGATATTATTATCCTCCGGACATCCGGCAATTGAACTGGCGAA
AAAATTTGGTCTGGGAACAAAAACCGTCAGTATTTATCGTAAGAAGGTTATGTATCGTTTGGGGATGGACTCTTCACCGC
TATCTCTGTTTCGGGGACTGAAACTAGACGCGCATTTACAGCGCACTGCTTTTGCACATAACCCTGCTGTACCTGACGAT
AATTGCGCGTTACCGATTGCAGTAGGAATGAATTAA

Protein sequence :
MRNVIIYGINWTNCYALQSIFKQKYPEKCVKTCNSLTALLHSLSDMPDAGLILALNPHEHVYLFHALQARLQNRKVLVVA
DRLYYIDRCVLQYFGVMDYVLKDELSCAIRSEREKLRLPEAWLRFCHRPQKKTVAATYAFNAGETPEEVLFNINQYAWWN
LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKVMYRLGMDSSPLSLFRGLKLDAHLQRTAFAHNPAVPDD
NCALPIAVGMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sprB NP_806469.1 AraC family transcriptional regulator Virulence SPI-1 Protein 5e-117 100
sprB NP_457260.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 5e-117 100
sprB AAD37785.1 transcriptional regulator SprB Virulence SPI-1 Protein 2e-116 99
sprB YP_217785.1 transcriptional regulator Virulence SPI-1 Protein 3e-116 99
sprB NP_461787.1 transcriptional regulator Virulence SPI-1 Protein 3e-116 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29090 YP_005218411.1 AraC-family transcriptional regulator VFG0530 Protein 1e-116 99