|
Name : STBHUCCB_29080 (STBHUCCB_29080) Accession : YP_005218410.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 2835001 - 2835849 bp Length : 849 bp Strand : + Note : similar to ABC-type Mn2+/Zn2+ transport systems, permease components COG1108'; similar to SitD of Proteobacteria UniRef RepID=Q3L7K1_ECOLX DNA sequence : ATGTTCTTAGCAACGTTACTGGAACCCTTTCAGTTTGATTTTATGGTGAACGCCCTTATGGTTTCGGTCATTGTGGCGAT TCCCTGCGCCTTGCTGTCCGTGTTTTTAGTGTTAAAAGGCTGGGCGTTAATGGGCGACGCAATGAGTCATGCGGTATTCC CCGGGGTCGTGCTGGCATATATTGTGGGGATTCCCCTGGCGATTGGCGCTTTCATTGCCGGATTATTTTGCGCTATCGCC ACCGGTTATCTGGACGATAACAGCCGCATCAAACGTGATACGGTGATGGGCATCGTCTTTTCCGGGATGTTTGGCGCAGG TCTGGTGCTCTATGTTTCTATTCAATCGGAAGTGCATCTGGATCACATCCTGTTTGGGGATATGCTGGGCGTATCGCTGG GGGATATCGTACAAACGTCGGTTATTGCACTGGGTATTGCGTTAATCATAGGGCTGAAATGGAAAGATCTCCTGCTACAC GCTTTTGACCCGCACCAGGCGAAAGCCAGCGGGCTGAATACGACGCTACTGCATTATGGCCTGCTATGTATGATTGCGCT GACTATCGTCGCCACGCTGAAATCGGTGGGCATTATTCTGTCGATTTCATTGCTTATCGCCCCCGGCGCAATTGCCATTT TGCTGACGCGACGCTTTGCGCGCGCGCTGGGATTAGCGGTGAGTCTGTCAGTTATTACCGCTTTTGCGGGCGTCTATCTG TCTTTTTATCTTGATAGCGCGCCAGCGCCGACCATCGTGGTATTATTTGCCATCGTGTTTATTGCGGTATTTATTTACGC AACATGGCGCGACAGGCGTAATGAAATCGTACCAGAGGCGCAAGGTTAA Protein sequence : MFLATLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIA TGYLDDNSRIKRDTVMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH AFDPHQAKASGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYL SFYLDSAPAPTIVVLFAIVFIAVFIYATWRDRRNEIVPEAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 6e-103 | 100 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 6e-103 | 100 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 5e-103 | 99 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 8e-103 | 99 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-103 | 99 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 8e-34 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STBHUCCB_29080 | YP_005218410.1 | hypothetical protein | BAC0352 | Protein | 3e-103 | 99 |
| STBHUCCB_29080 | YP_005218410.1 | hypothetical protein | BAC0442 | Protein | 6e-55 | 54 |
| STBHUCCB_29080 | YP_005218410.1 | hypothetical protein | BAC0441 | Protein | 6e-34 | 43 |
| STBHUCCB_29080 | YP_005218410.1 | hypothetical protein | BAC0351 | Protein | 5e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STBHUCCB_29080 | YP_005218410.1 | hypothetical protein | VFG0528 | Protein | 3e-103 | 99 |
| STBHUCCB_29080 | YP_005218410.1 | hypothetical protein | VFG0527 | Protein | 4e-34 | 41 |
