Gene Information

Name : STBHUCCB_29050 (STBHUCCB_29050)
Accession : YP_005218407.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : putative periplasmic iron-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2832418 - 2833335 bp
Length : 918 bp
Strand : +
Note : similar to Uncharacterized periplasmic iron-binding protein HI_0362 of Proteobacteria UniRef RepID=Y362_HAEIN

DNA sequence : 
ATGACGAATCTACATCGTCTAAAAACACTCCTGATTGCCGGTATTGTCGCGATACTCGCGCTATCGCCAGCCTATGCAAA
AGAGAAATTTAAAGTCATCACCACGTTTACCGTTATTGCCGACATGGCGAAAAACGTGGCGGGCGACGCAGCGGAAGTCA
GCTCGATTACCAAGCCCGGCGCTGAAATCCATGAGTATCAGCCAACGCCCGGCGATATTAAACGAGCGCAGGGGGCACAG
CTTATCCTCGCGAATGGTCTGAACCTGGAGCGATGGTTCGCCCGCTTTTATCAGCACCTTTCCGGTGTACCGGAAGTCGT
CGTCTCCACCGGCGTCAAACCGATGGGCATTACCGAAGGCCCGTATAACGGTAAACCGAACCCGCACGCCTGGATGTCGG
CAGAAAACGCGCTGATTTATGTCGATAACATTCGCGACGCCCTGGTGAAGTACGATCCGGATAATGCGCAGATCTATAAG
CAAAATGCCGAACGCTATAAAGCGAAAATTCGCCAGATGGCCGATCCGTTGCGTGCCGAGCTGGAAAAAATTCCCGCCGA
TCAGCGCTGGCTGGTCACCAGTGAAGGCGCGTTCTCTTACCTGGCGCGCGATAACGACATGAAAGAGCTTTATCTCTGGC
CAATTAACGCCGATCAACAGGGGACGCCAAAACAGGTGCGTAAAGTGATTGATACCATTAAAAAGCACCATATTCCCGCC
ATCTTTAGCGAGAGTACGGTTTCCGATAAACCCGCCCGCCAGGTCGCGCGTGAATCCGGCGCGCATTATGGCGGCGTACT
GTATGTCGATTCTCTGAGCGCCGCTGACGGCCCTGTGCCAACCTATCTGGATCTGCTGCGCGTCACGACCGAAACCATCG
TCAACGGCATTAACGACGGACTGAGGAGTCAACAATGA

Protein sequence : 
MTNLHRLKTLLIAGIVAILALSPAYAKEKFKVITTFTVIADMAKNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLNLERWFARFYQHLSGVPEVVVSTGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDNAQIYK
QNAERYKAKIRQMADPLRAELEKIPADQRWLVTSEGAFSYLARDNDMKELYLWPINADQQGTPKQVRKVIDTIKKHHIPA
IFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVNGINDGLRSQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 3e-135 100
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 3e-135 100
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 3e-135 100
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-135 100
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-135 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29050 YP_005218407.1 putative periplasmic iron-binding protein BAC0349 Protein 1e-135 100
STBHUCCB_29050 YP_005218407.1 putative periplasmic iron-binding protein BAC0439 Protein 8e-90 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_29050 YP_005218407.1 putative periplasmic iron-binding protein VFG0525 Protein 1e-135 100