Gene Information

Name : STBHUCCB_27140 (STBHUCCB_27140)
Accession : YP_005218228.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Periplasmic fimbrial chaperone protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2634404 - 2635144 bp
Length : 741 bp
Strand : -
Note : similar to P pilus assembly protein, chaperone PapD COG3121'; similar to Periplasmic fimbrial chaperone protein of Salmonella enterica UniRef RepID=C0Q6R9_SALPC

DNA sequence :
ATGAAAATTATTAGTTTTGGTGTAATGGCGGCTGTTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCGCTGA
GCAGAAATTAAGTTTAAACACTAAATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGTTG
GAGCCACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCG
CCTGCTCCTTTTTTGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGG
TGGTGACATGCCAACGGATCGTGAGACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAACCGTCGGATA
CACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATCAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTG
AAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGGCGGGCAACAAACTTAAGGTGGAGAACCCCACCCC
GTTTTACATGAATTTAGCCTCCGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCTTTTGCTGACA
AAACACTAAATATGCCAGGTAGTGCCCATGGTGATGTCGAGTGGAGAGTTATTACTGACTTTGGTGGTGAAAGTCATCCG
TTCCACTACGTCCTTAAATAA

Protein sequence :
MKIISFGVMAAVLFVSNSITPPVYAAEQKLSLNTKSFSVKLGATRVIYHAGTVGATLSVSNPQNYPILVQSSVKAADKSS
PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAV
KGTPEDVAGNLRWVEAGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHGDVEWRVITDFGGESHP
FHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 5e-114 100
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-54 47
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-54 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_27140 YP_005218228.1 Periplasmic fimbrial chaperone protein VFG0943 Protein 9e-52 52
STBHUCCB_27140 YP_005218228.1 Periplasmic fimbrial chaperone protein VFG0850 Protein 6e-55 50
STBHUCCB_27140 YP_005218228.1 Periplasmic fimbrial chaperone protein VFG0858 Protein 6e-52 50
STBHUCCB_27140 YP_005218228.1 Periplasmic fimbrial chaperone protein VFG0852 Protein 5e-53 49