Gene Information

Name : STBHUCCB_26060 (STBHUCCB_26060)
Accession : YP_005218122.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Unknown
Product : Transposase for insertion sequence element IS200
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2531277 - 2531786 bp
Length : 510 bp
Strand : -
Note : similar to Transposase for insertion sequence element IS200 of Bacteria UniRef RepID=T200_SALTI

DNA sequence :
TTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGGGTCCCAATGGGGGACGAAAAGAGCTTAGCGCACAC
CCGATGGAACTGTAAATATCACATAGTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAG
TAGGCAGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCGGAATGTTGTGCAGATCATATTCAC
ATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATGGGATATCTGAAGGGTAAAAGTAGTCTGATGCTTTA
CGAGCAGTTTGGGGATCTAAAATTCAAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTA
AGAATACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGTGAGCAATTATCGATCCCGTAT
CCGGGCAGCCCGTTTACGGGCCGTAAGTAA

Protein sequence :
MRSGNCKSSTRNQKGVPMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIH
MLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPY
PGSPFTGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 1e-69 99
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-44 66
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-47 63
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 2e-32 54
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 2e-32 54