Gene Information

Name : STBHUCCB_24520 (STBHUCCB_24520)
Accession : YP_005217974.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2379927 - 2380640 bp
Length : 714 bp
Strand : -
Note : similar to P pilus assembly protein, chaperone PapD COG3121'; similar to Chaperone protein fimC of Enterobacteriaceae UniRef RepID=FIMC_SALTY

DNA sequence : 
ATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAATTAGGATTTATTGTTCTTCTCACGTTATTTACTTCGCTGAA
CGTACAGGCGGCGGGGGGGATTGCATTAGGCGCCACGCGTGTTATTTATCCCTCGGCGGCGAAACAGACTTCTCTGGCAA
TCAGTAATAGCGATACTCAAGAACGTTACCTCGTCAATTCATGGATCGAAAATAACGCTGGGCAGAAAGAAAAAACGTTT
ATCGTTACGCCGCCTTTATTCGTCAGCGAGCCCAAAAGTGAAAACACGCTGCGTATTATCTACGCCGGGCAACCGCTACC
CGAGGATCGGGAGTCGTTATTCTGGATGAACGTGAAAGCCATCCCGTCGGTCGATAAAAGTCATATTGAAGGAAAAAACG
TTCTGCAACTGGCGATTCTGTCGCGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCGCAGACGCCGGAAGACGCGCCG
ACCTTGCTGAAATTTTCCCGTGTCGGCAACCATCTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATAT
CAGCGTGGGTGCGAAAAAGATTGATAACGTGATGATCGCGCCAAAAAGCGACATGCAAATTCCCTTACCGACTGGCGCGC
AGGGCAGCGTGACATTTCAGACCGTCAATGATTACGGCGCATTGACGTCGGCGACAACAGCCAGTCTCGGTTAA

Protein sequence : 
MQKVFFTMLNSIKLGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENNAGQKEKTF
IVTPPLFVSEPKSENTLRIIYAGQPLPEDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAP
TLLKFSRVGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGSVTFQTVNDYGALTSATTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-52 50
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 2e-48 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_24520 YP_005217974.1 hypothetical protein VFG0445 Protein 6e-103 99
STBHUCCB_24520 YP_005217974.1 hypothetical protein VFG0911 Protein 9e-49 50
STBHUCCB_24520 YP_005217974.1 hypothetical protein VFG1644 Protein 1e-48 50
STBHUCCB_24520 YP_005217974.1 hypothetical protein VFG0875 Protein 6e-54 47
STBHUCCB_24520 YP_005217974.1 hypothetical protein VFG0455 Protein 7e-41 42