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Name : STBHUCCB_24510 (STBHUCCB_24510) Accession : YP_005217973.1 Strain : Salmonella enterica P-stx-12 Genome accession: NC_016832 Putative virulence/resistance : Virulence Product : Outer membrane usher protein fimD Function : - COG functional category : - COG ID : - EC number : - Position : 2377284 - 2379896 bp Length : 2613 bp Strand : - Note : similar to putative outer membrane usher protein PRK09828; similar to Outer membrane usher protein fimD of Enterobacteriaceae UniRef RepID=FIMD_SALTY DNA sequence : ATGAAGAAGACAACCTGGTTTGCAGGGCGATTTCCCGGCTATGTATCACCGTTAAGCGGCGTGGCGCTGTCGGTGTTGGC AGCTCTGTGTCCGCTGACGAGCCGCGGCGAAAGTTATTTCAACCCTGCGTTTTTGTCGGCGGATACCGCGTCCGTGGCGG ATTTATCTCGCTTTGAAAAAGGTAATCATCAGCCTCCCGGTATTTACCGGGTGGATATCTGGCGTAACGACGAATTCGTA GCGACGCAGGATATTCGTTTTGAGGCGGGCGCCGTGGGCGCCGGCGATAAATCCGGCGGCCTGATGCCTTGTTTTACACC GGAGAGGATTAAACGGCTGGGCGTGAATACCGCGGTGTTCCCTGTCTCAGATAAAGGCGTCGATACCACGTGTATTCACC TTCCTGAGAAAATCCCGGGCGCGGAGGTCGCGTTCGATTTCGCGTCGATGCGCTTAAACATTAGCTTGCCGCAGGCGTCA TTGCTCAACAGCGCGCGTGGCTATATCCCGCCGGAAGAGTGGGATGAAGGGATACCCGCCGCACTCATTAATTACAGTTT TACCGGTAGCCGCGGAACAGACAGCGATAGCTATTTTTTGAGTCTGCTGAGCGGGTTGAACTATGGCCCCTGGCGGCTGC GTAATAACGGAGCCTGGAGCTATTCGAAAGGGGACGGCTATCATTCGCAACGCTGGAACAACATTGGCACCTGGGTACAG CGCGCCATCATTCCGCTAAAAAGCGAACTGGTCATGGGGGACAGCCATACCGGGAACGATGTTTTCGACAGCGTCGGCTT TCGCGGAGCGCGGCTGTACTCTTCTGACAATATGTATCCCGATAGCCTGCAGGGCTACGCCCCCACGGTCAGAGGGATCG CCCGGACGGCGGCAAAGCTGACGATACGACAGAACGGGTATGTTATCTACCAAAGCTATGTGCCGCCGGGCGCGTTTGCG ATTACCGATCTTAATCCTACCTCTTCCAGCGGCGACCTTGAGGTGACGGTAGATGAAAAAGACGGTAGCCAACAACGTTA CACGGTGCCTTACTCTACCGTTCCGCTATTGCAGCGTGAGGGCAGGGTGAAGTATGACCTGGTGGCCGGGGATTTTCGCA GCGGCAATAGTCAGCAGTCTTCGCTATTCTTTTTCCAGGGAACGGTGATTGCCGGCCTGCCTGCGGGGCTGACGGCTTAC GGCGGTACGCAACTTGCCGATCGTTACCGTGCTGTGGTGGTCGGGGCGGGGCAAAATTTGGGTGACTGGGGGGCCGTGTC GGTCGATGTCACACATGCGCGTAGCCAACTGGCAGATGACAGCACCCATCAGGGGCAATCGTTGCGTTTTCTGTACGCCA AATCGCTGAATAATTACGGGACTAATTTTCAATTGCTGGGTTACCGCTATTCCACGCGCGGATTTTACACCCTGGATGAT GTGGCATACCGCAGTATGGAAGGGTACGACTACGAATACGATAGCGACGGACGCCGCCATAAAGTGCCGGTGGCGCAGAG CTACCACAATCTCCGCTACAGCAAAAAAGGCCGCTTTCAGGTCAATATTTCGCAAAATCTGGGGAATTACGGGTCACTGT ATCTTTCCGGCAGTCAACAAAATTACTGGAATACGGCGGATACCAATACCTGGTATCAACTGGGATACGCCAGTGGATGG CAAGGCATAAGTTATTCGCTGTCATGGTCGTGGAGCGAGTCGGTGGGGATCTCAGGCGCCGACCGCATTCTGGCATTCAA TATGTCCGTTCCGTTTAGCGTTCTGACCGGACGGCGCTATGCGCGCGACACTATTCTTGATCGTACTTATGCCACGTTTA ACGCCAACCGCAACCGCGACGGCGACAATAGCTGGCAGACCGGTGTGGGCGGCACGCTTCTGGAAGGACGTAATCTGAGC TACAGCGTGACGCAGGGGCGTAGCAGTACCAATGGTCATAGCGGCAGCGCCAGCGCTAGCTGGCAGGCGACGTATGGCAC GCTGGGCGTGGGATATAACTACGATCGCGATCAGCATGACTATAACTGGCAACTTTCCGGCGGCGTGGTCGGTCATACGG ATGGTATTACGTTTAGCCAACCGTTGGGCGATACCAATGTCTTGATTAAAGCGCCGGGAGCGAAAGGCGTGCGCATCGAA AACCAGACCGGCGTGAAAACGGACTGGCGGGGCTATGCGGTAATGCCCTACGCCACGGTATATCGCTATAACCGCGTCGC GTTAGATACCAACACGATGGACAACCATACCGATGTCGAAAATAACGTCAGCAGCGTGGTGCCGACTGAAGGCGCGCTGG TGCGGGCTGCTTTTGATACGCGGATAGGCGTAAGGGCAATCATTACCGCGAGGCTTGGCGGACGTCCGTTACCGTTTGGC GCGATAGTACGAGAAACCGCCAGCGGCATTACCAGCATGGTCGGCGATGACGGACAAATTTATCTGAGCGGCTTGCCGCT AAAAGGTGAACTGTTCATCCAGTGGGGAGAGGGGAAAAACGCGCGTTGTATCGCCCCTTACGCCCTGGCGGAGGATAGCC TGAAGCAGGCGATTACGATAGCCAGCGCGACCTGTATCCGTCCGTCGTCATAA Protein sequence : MKKTTWFAGRFPGYVSPLSGVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEKGNHQPPGIYRVDIWRNDEFV ATQDIRFEAGAVGAGDKSGGLMPCFTPERIKRLGVNTAVFPVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQAS LLNSARGYIPPEEWDEGIPAALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWSYSKGDGYHSQRWNNIGTWVQ RAIIPLKSELVMGDSHTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVPPGAFA ITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSGNSQQSSLFFFQGTVIAGLPAGLTAY GGTQLADRYRAVVVGAGQNLGDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGNYGSLYLSGSQQNYWNTADTNTWYQLGYASGW QGISYSLSWSWSESVGISGADRILAFNMSVPFSVLTGRRYARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLS YSVTQGRSSTNGHSGSASASWQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHTDGITFSQPLGDTNVLIKAPGAKGVRIE NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDTRIGVRAIITARLGGRPLPFG AIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKNARCIAPYALAEDSLKQAITIASATCIRPSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 49 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 2e-176 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STBHUCCB_24510 | YP_005217973.1 | Outer membrane usher protein fimD | VFG0446 | Protein | 0.0 | 99 |
| STBHUCCB_24510 | YP_005217973.1 | Outer membrane usher protein fimD | VFG0876 | Protein | 0.0 | 49 |
| STBHUCCB_24510 | YP_005217973.1 | Outer membrane usher protein fimD | VFG1645 | Protein | 1e-176 | 48 |
| STBHUCCB_24510 | YP_005217973.1 | Outer membrane usher protein fimD | VFG0912 | Protein | 1e-176 | 48 |
| STBHUCCB_24510 | YP_005217973.1 | Outer membrane usher protein fimD | VFG0454 | Protein | 7e-149 | 41 |
