Gene Information

Name : STBHUCCB_24100 (STBHUCCB_24100)
Accession : YP_005217934.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Ferric enterobactin transport system permease protein fepD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2340211 - 2341218 bp
Length : 1008 bp
Strand : +
Note : similar to iron-enterobactin transporter membrane protein PRK10441; similar to Ferric enterobactin transport system permease protein fepD of Enterobacteriaceae UniRef RepID=FEPD_ECOLI

DNA sequence :
ATGTCATGCTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAG
CCTGGTCATTGGCGCGAAACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGCGCATTGGGTCTCGCCGGGGCGCTC
ATGCAAACACTCACTCGTAACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACT
GGGCGCGGCGCTGTTTGGTTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCGCTGA
TTGTCGCCTTCACCGGTAGTCAGGGCGGCGGCCAATTAAGCCCGGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCG
GTACTGGAAGGACTAACCAGCGGCATCGCGTTGTTAAATCCAGAGGTCTATGACCAGCTTCGCTTCTGGCAGGCGGGATC
GCTGGACATTCGTAGCCTGCAAACGTTGAAAGTCGCGCTCGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGA
GCCGAGCGCTGAACAGCCTGAGCCTCGGCAGCGATACCGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATT
GGTTTACTGGCGATTACCGTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGCGCAGACCACCGTTGGTCGCTGCCGGTAACACTACTGGCAACCCCTGCTCTGCTGC
TTTTTGCCGATATTATTGGTCGTCTGTTAGTGCCGGGCGAACTCCGCGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCG
GTACTTATCTTTCTGGTACGCCGTAAATCGAGCGGAGGCGGCCTGTGA

Protein sequence :
MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAP
VLIFLVRRKSSGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-32 46
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_24100 YP_005217934.1 Ferric enterobactin transport system permease protein fepD VFG0926 Protein 9e-102 89