Gene Information

Name : STBHUCCB_23970 (STBHUCCB_23970)
Accession : YP_005217921.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2325907 - 2327142 bp
Length : 1236 bp
Strand : +
Note : similar to Predicted phosphoadenosine phosphosulfate sulfotransferase COG3969; similar to Uncharacterized protein ybdN of Bacteria UniRef RepID=YBDN_ECOLI

DNA sequence :
ATGTCGGTTTATAAAGTTCCGCTTGAGCAAAATGTTCTGGAAGCGGCTCAAGAGCGTATAACATGGCCCCTGGAAACTTT
ACCCCGGGTCTGCGTCTCATTTTCTGGTGGTAAAGATTCAGGACTTATGCTGCACCTGACGGCAACGTTGGCGCGCAAAA
TGAATAAAAAGATCCACGTTCTTTTCATTGACTGGGAAGCGCAATTCTCCTGTACTATCGCTTATATTGAATCGTTACGT
GAATACTACGCGGACGTTATTGAGCGTTTTTATTGGGTCGCATTACCCTTAACCACACAAAATTCCCTTTCACAATACCA
GCCGGAGTGGCAGTGTTGGCAGCCGGGAACCGACTGGGTACGACAACCGCCAGAAGATGCGATTACCGATCCGGCCTTTT
TTTCCTTTTATCAACACGGCATGACTTTTGAACAGTTCGTTCGCGATTTTGCCGACTGGTTTTCAGAAAAGCGCCCTGCC
GCTATGCTGGTCGGTATTCGTTCCGACGAATCCTATAACCGGTTTGTCGCTATCGCTAACTCGCATAAGCTGCGCTTTGC
CGACGATAAGCCCTGGACCACGTTGGCCCCCAAGGGGCACACCTGGTATATCTACCCCATCTATGACTGGAAAACCGCAG
ATATCTGGACCTGGTTCGCCAAAACAGGTAAATCATGTAACCCCTTGTATAATTTGATGTATCAGGCTGGCGTACCGGTC
CGTTACATGCGTATTTGCGAACCATTCGGCCCGGAACAACGGCAGGGGTTATGGCTGTATCATGTTATCGAACCTGAGCG
CTGGGCGGCCATGTACGCCAGAGTCAGCGGCGTACTCAGCGGAGGAATATACGCCGGGCAGGACAGCCATTTTTACGGCC
ACCGGAAAATTTTAAAACCCGATCACCTTAACTGGGAGGAGTACGCGCTGCTCCTGCTACACAGTATGCCTGAAGTCACT
GCCGAACATTACCGTAATAAAATCGCCGTTTATTTGCAGTGGTATAAGAAAAAAGGCATGAACACCATTCCACAGACGCA
GCAGGGCGATATCGGATCGCGGGATATTCCGTCATGGCGACGGATCTGCAAAGTATTACTGAACAATGATTACTGGTGCC
GGGCGCTGTCATTCAGTCCGACAAAACCTAAGAGTTACCAGCGTTATAACGAACGCATGAAAGCTAAACGCCAGGAATGG
GGGATCTTATGCAACACCGACTCACAACCGAAATAA

Protein sequence :
MSVYKVPLEQNVLEAAQERITWPLETLPRVCVSFSGGKDSGLMLHLTATLARKMNKKIHVLFIDWEAQFSCTIAYIESLR
EYYADVIERFYWVALPLTTQNSLSQYQPEWQCWQPGTDWVRQPPEDAITDPAFFSFYQHGMTFEQFVRDFADWFSEKRPA
AMLVGIRSDESYNRFVAIANSHKLRFADDKPWTTLAPKGHTWYIYPIYDWKTADIWTWFAKTGKSCNPLYNLMYQAGVPV
RYMRICEPFGPEQRQGLWLYHVIEPERWAAMYARVSGVLSGGIYAGQDSHFYGHRKILKPDHLNWEEYALLLLHSMPEVT
AEHYRNKIAVYLQWYKKKGMNTIPQTQQGDIGSRDIPSWRRICKVLLNNDYWCRALSFSPTKPKSYQRYNERMKAKRQEW
GILCNTDSQPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-125 60
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-125 60
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 2e-123 60
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 7e-124 60
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 3e-124 60
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 7e-124 60
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-125 60
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 7e-124 60
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 6e-125 58
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 6e-125 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_23970 YP_005217921.1 hypothetical protein VFG1504 Protein 1e-123 60