Gene Information

Name : STBHUCCB_19420 (STBHUCCB_19420)
Accession : YP_005217482.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1885007 - 1886569 bp
Length : 1563 bp
Strand : +
Note : similar to Dipeptidase COG4690; similar to Probable dipeptidase of Gammaproteobacteria UniRef RepID=PEPD_SALDU

DNA sequence :
ATGCCGGTAAAGAATATTGCTGGCTCGATCACTTTCTCGGTTTCCAATCCAGGGTCAATTCATCCCATAACGCGTTATTC
AGTGGGAACCTTTATGAAAAAGTATCTTGCTTTCGCCGTTACGCTGCTGGGTATGGGTAAAGTCATCGCCTGTACTACCC
TTTTGGTAGGCAATCAGGCTTCGGCTGACGGCTCCTTTATTATCGCGCGCAACGAGGATGGCTCGGCAAATAACGCCAAG
CATAAGGTTATTCATCCCGTCGCGTTTCATCAACAAGGCGAGTATAAAGCACATCGCAACAATTTTAGCTGGCCGCTTCC
GGAGACAGCGATGCGCTATACGGCGATTCATGACTTTGATACTAACGATAACGCCATGGGTGAAGCCGGTTTCAATTCGG
CGGGCGTCGGAATGAGCGCAACGGAAACCATTTACAACGGCAGAGCGGCGCTGGCTGCCGATCCTTACGTGACAAAAACG
GGAATCACGGAAGACGCCATTGAGTCCGTGATCCTGCCAGTGGCGCAATCGGCGCGTCAGGGCGCCAAATTACTGGGAGA
TATTATTGAACAAAAAGGCGCGGGCGAAGGTTTCGGCGTCGCGTTTATTGATAGCAAAGAGATATGGTATCTGGAGACGG
GAAGCGGACATCAATGGCTGGCAGTACGACTTCCGGCAGATAGCTATTTCGTTTCCGCCAATCAGGGACGTTTACGCCAT
TACGATCCGAATGATAACGCGAATTATATGGCGTCACCAACGTTAGTAAGCTTTGCGAAAAAGCAGGGATTATATGATCC
GGCCCGCGGCGAATTCGACTTTCATCAAGCCTATTCGCAGGATAACAAAAACGATACCACCTATAATTATCCGCGCGTCT
GGACGCTACAACACCAGTTTAATCCGCATCTGGATACGGTCGTTAGCGAAGGGGAAACATTTTCTGTTTTTTTAACGCCA
ATAACGAAGATCAGCGTGGCGGCAGTAAAAAACGCGTTACGCAATCACTATCAGGGAACGTCGCACGACCCTTATGCCAG
TCATAATCCACAAGAACCATGGCGACCTATATCCGTTTTTCGTACCCAGGAGTCACATATTTTACAGGTCAGACCGAAAT
TACCGCAGGCTATCGGCAACGTAGAATACATCGCCTATGGAATGCCATCTCTTAGCGTCTATCTCCCCTATTACCAGGGG
ATGCGTCATTATCAACCCGGAGATGATAAAGGAACCGATCGGGCGAGCAACGACTCTACCTACTGGACATTCCGCACGCT
GCAAACACTGGTTATGCAAGACTACAATACGTTTGCGCCAGATGTGCAACATGCCTGGAAAACATTTGAACAGCAAACAG
CTAAGCAACAGTATAAGATGGAGCAGAGCTATCTGAGATTATATGCGTCGCATCCGAAAGAAGCACAACGCTTACTGCAA
AATTTTGAAGATAAAACGATGCAAAATGCGCAGACGCTCGCCCGTCGCCTGACCAATAATATTATTACGACAATGACTTA
CCGCACAGATATGAAATATCACTTTTCAAGTACGCAGCCATAA

Protein sequence :
MPVKNIAGSITFSVSNPGSIHPITRYSVGTFMKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAK
HKVIHPVAFHQQGEYKAHRNNFSWPLPETAMRYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKT
GITEDAIESVILPVAQSARQGAKLLGDIIEQKGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRH
YDPNDNANYMASPTLVSFAKKQGLYDPARGEFDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFSVFLTP
ITKISVAAVKNALRNHYQGTSHDPYASHNPQEPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQG
MRHYQPGDDKGTDRASNDSTYWTFRTLQTLVMQDYNTFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQ
NFEDKTMQNAQTLARRLTNNIITTMTYRTDMKYHFSSTQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipD NP_455591.1 putative secreted peptidase Virulence SPI-5 Protein 0.0 100
pipD NP_460067.1 pathogenicity island-encoded protein D Virulence SPI-5 Protein 0.0 99
pipD AAC33721.1 dipeptidase homolog Virulence SPI-5 Protein 2e-178 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_19420 YP_005217482.1 dipeptidase VFG0594 Protein 0.0 99