Gene Information

Name : STBHUCCB_19350 (STBHUCCB_19350)
Accession : YP_005217475.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Resistance
Product : Homoprotocatechuate degradative operon repressor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1879628 - 1880068 bp
Length : 441 bp
Strand : +
Note : similar to Homoprotocatechuate degradative operon repressor of Proteobacteria UniRef RepID=HPCR_ECOLX

DNA sequence :
ATGCATGATTCATTAACCATCGCCTTGCTTCAGGCGCGCGAAGCGGCAATGACCTATTTCCGCCCCATCGTTAAAAGCCA
CAATCTGACCGACCAGCAATGGCGCATTGTGCGAATCCTGGCCGATAGCCCCTCTATGGATTTTCACGAGCTGGCCTTTC
GTACCTGTATTTTGCGTCCAAGTCTGACCGGAATATTGACGCGCATGGAGCGAGACGGACTGGTGTTGCGACTCAAGCCG
GTTAACGATCAGCGTAAGTTATATGTCATGTTGACGGAGCAGGGACAAACGTTGTACGCCCGTGCCCGGAGCGAGGTAGA
AGAGGCTTATCGAAAAATTGAGGCCGATTTCACGCCCGAAAAAACACAGCAATTGATGCTGCTGCTGGACGATCTTATTG
CTCTGGGGCGCCAGCATCCTGATAGCGAAGCGGAAGCATAG

Protein sequence :
MHDSLTIALLQAREAAMTYFRPIVKSHNLTDQQWRIVRILADSPSMDFHELAFRTCILRPSLTGILTRMERDGLVLRLKP
VNDQRKLYVMLTEQGQTLYARARSEVEEAYRKIEADFTPEKTQQLMLLLDDLIALGRQHPDSEAEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 5e-43 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_19350 YP_005217475.1 Homoprotocatechuate degradative operon repressor BAC0505 Protein 3e-33 57