Gene Information

Name : STBHUCCB_13740 (STBHUCCB_13740)
Accession : YP_005216932.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Secretion system apparatus protein ssaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1350374 - 1350751 bp
Length : 378 bp
Strand : +
Note : similar to Secretion system apparatus protein ssaO of Salmonella enterica UniRef RepID=SSAO_SALTY

DNA sequence : 
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCAGCAAACTTACCGTGCTTGATCAGCAGCAACA
GGCGATTATTACTGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGACTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTTGGATAAGAAACAACAAATGGCCGGACTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAGAATCAGTATCAGCAGCTTGTCTCCAGGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Protein sequence : 
METLLEIIARREKQLRSKLTVLDQQQQAIITEQQICQTRALAVTTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSRRSELQKNFNALMKKKEKITMVLSDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 1e-36 100
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 1e-36 100
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 1e-36 99
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-36 99
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 1e-36 99
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 8e-31 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13740 YP_005216932.1 Secretion system apparatus protein ssaO VFG0516 Protein 4e-37 99