Gene Information

Name : STBHUCCB_13690 (STBHUCCB_13690)
Accession : YP_005216927.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Secretion system apparatus protein ssaK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1345106 - 1345642 bp
Length : 537 bp
Strand : +
Note : similar to type III secretion system protein HrpB PRK09098; similar to Secretion system apparatus protein ssaK of Salmonella enterica UniRef RepID=SSAK_SALTY

DNA sequence : 
GTGAGCTCCGCTTACCGTAAGGCTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCA
ACAAGAAATAGCGTGGTTGCGTAAAAATACGCTGGAAAAAATGGAAGTAGAATGGCTGGAACAACATGTAAAACATTTAC
AAGAAGATGAAAATCAATTTCGTTCATTGGTCGATCACGCCGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTG
GCCTGGTTCGACCAACAGTCGGTAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGG
AGCGCTTTATTTGCGTATTCATCCTGAAAAAGAGGCATTGATGCGTGAAACTTTTGGCAAGCGGTTTACGCTGATTATCG
AGCCTGGTTTCTCTCCCGATCAGGCTGAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAAC
GCGTTACTGAAATGGTTACGTAATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Protein sequence : 
MSSAYRKAEKIIRDAYRYQREQKVEQQQEIAWLRKNTLEKMEVEWLEQHVKHLQEDENQFRSLVDHAAHHIKNSIEQVLL
AWFDQQSVDSVMCHRLARQATAMAEEGALYLRIHPEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFN
ALLKWLRNGEDKRGSDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1279 NP_805082.1 pathogenicity island protein Not tested SPI-2 Protein 5e-80 99
STY1709 NP_456117.1 putative pathogenicity island protein Virulence SPI-2 Protein 5e-80 99
ssaK NP_460376.1 type III secretion system apparatus protein Virulence SPI-2 Protein 9e-78 98
ssaK YP_216419.1 secretion system apparatus protein SsaK Virulence SPI-2 Protein 3e-79 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13690 YP_005216927.1 Secretion system apparatus protein ssaK VFG0511 Protein 3e-78 98