Gene Information

Name : STBHUCCB_13670 (STBHUCCB_13670)
Accession : YP_005216925.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Secretion system apparatus lipoprotein ssaJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1343716 - 1344405 bp
Length : 690 bp
Strand : +
Note : similar to Type III secretory pathway, lipoprotein EscJ COG4669'; similar to Secretion system apparatus lipoprotein ssaJ of Enterobacteriaceae UniRef RepID=SSAJ_SALTY

DNA sequence :
GTGGATCTTTATCGCTCATTGCCAGAAGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATCGATGCGGA
AAAAAAACAGGAAGAGGACGGTGTTACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTA
ACGGTTATCCGCATCGGCAGTTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAA
CAGCAGAAGATTAATTTTTTAAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGT
GACCATTGCGCTACCGACTTATGATGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCTC
AGGTCAACATGGAGGCCTTTCGGGTAAAAATTAAGGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATT
AGTATCTTGATGCAGCCTGCTGAATTCAGAATGGTACCTGACGTACCCGCGAGACAAACATTCTGGATTATGGACGTTAT
CAACGCCAATAAAGGGAAGGTGGTGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTAT
TAGGAGTGGGCATCCTGATCGGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEE
QQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYDEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
SILMQPAEFRMVPDVPARQTFWIMDVINANKGKVVKWLMKYPYQLMLSLTGLLLGVGILIGYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 1e-95 99
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 7e-95 99
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 1e-94 99
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 8e-95 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 1e-95 99
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 1e-74 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 3e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13670 YP_005216925.1 Secretion system apparatus lipoprotein ssaJ VFG0510 Protein 4e-95 99