Gene Information

Name : STBHUCCB_13650 (STBHUCCB_13650)
Accession : YP_005216923.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Type III secretion system protein, SsaH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1343109 - 1343399 bp
Length : 291 bp
Strand : +
Note : similar to Type III secretion system protein, SsaH family of Enterobacteriaceae UniRef RepID=B4T4U7_SALNS

DNA sequence : 
GTGGAATCATTGCTAAAATCTGAAGTTATTAGCGACGATGTTCGACGGTTGCTGCTGGAAATCATGTTTGCGGGCGTTAA
CCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGTTATTGTTCCGGATAAAAAATTACAGTTGGTAT
GTTTGGCATTATTGTTGGCGGGTTTAAATGAGCCGTTAAAGGCCGCGAAAATTTTATCGGATATTGATTTGCCAGAGGCT
ATGGCGCTACGAATGTTATTTCCTGCACCAAATGAGGGGTTTGAAAATTGA

Protein sequence : 
MESLLKSEVISDDVRRLLLEIMFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEA
MALRMLFPAPNEGFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH NP_456121.1 putative pathogenicity island protein Virulence SPI-2 Protein 6e-17 100
ssaH NP_805078.1 pathogenicity island protein Virulence SPI-2 Protein 6e-17 100
ssaH NP_460372.1 type III secretion system apparatus protein Virulence SPI-2 Protein 1e-16 99
ssaH YP_216415.1 secretion system apparatus protein SsaH Virulence SPI-2 Protein 5e-26 99
ssaH CAA12194.1 SsaH Virulence SPI-2 Protein 1e-16 99
ssaH AAX49621.1 SsaH Virulence SPI-2 Protein 1e-16 99
ssaI AAC28875.1 SsaI Virulence SPI-2 Protein 6e-16 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13650 YP_005216923.1 Type III secretion system protein, SsaH VFG0508 Protein 4e-17 99