Gene Information

Name : STBHUCCB_13550 (STBHUCCB_13550)
Accession : YP_005216913.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Type III secretion system protein, YseE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1336535 - 1336777 bp
Length : 243 bp
Strand : +
Note : similar to Type III secretion system protein, YseE family of Salmonella enterica UniRef RepID=B4TUV7_SALSV

DNA sequence :
ATGACAACTCTGACCCGGTTAGAAGATTTGCTGCTTCATTCGCGTGAAGAGGCCAAAGGCATAATTTTACAATTAAGGGC
TGCCCGGAAACAGTTAGAAGAGAACAACGGTAGGTTACAGGATCCGCAGCAATATCAGCAAAACACCTTATTGCTTGAAG
CGATCGAGCAGGCCGAAAATATCATCAACATTATTTATTATCGTTACCATAACAGCGCACTTGTAGTGAGTGAGCAAGAG
TAA

Protein sequence :
MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGRLQDPQQYQQNTLLLEAIEQAENIINIIYYRYHNSALVVSEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaE NP_456132.1 putative secretion system protein Virulence SPI-2 Protein 9e-20 100
ssaE NP_805067.1 secretion system protein Virulence SPI-2 Protein 9e-20 100
ssaE NP_460361.1 secretion system effector Virulence SPI-2 Protein 1e-19 99
ssaE YP_216404.1 secretion system effector protein SsaE Virulence SPI-2 Protein 1e-19 99
ssaE AAC28877.1 putative secretory apparatus component Virulence SPI-2 Protein 1e-19 99
ssaE CAA12183.1 SsaE Virulence SPI-2 Protein 1e-19 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13550 YP_005216913.1 Type III secretion system protein, YseE VFG0497 Protein 4e-20 99