Gene Information

Name : STBHUCCB_13460 (STBHUCCB_13460)
Accession : YP_005216904.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Sensory histidine kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1324820 - 1326568 bp
Length : 1749 bp
Strand : +
Note : similar to Signal transduction histidine kinase regulating C4-dicarboxylate transport system COG4191; similar to Sensory histidine kinase of Enterobacteriaceae UniRef RepID=C0Q5Z4_SALPC

DNA sequence :
GTGTTGGCGGCAGTAGGGCTACTTTGTCATGGCGCGTGGGCAGGGACGTGGAATATCGGTATTTTGGCCATGCGCGGCGA
GGCGTCTACGCGTAGCCACTGGCAACCGTTGGCAAAGACATTAAGCCAACAGCTTCCAGGCGAAACCTTTCACATCCAGC
CGCTGGATCTGCATCAAATGCAGGAGGCCGTTAACCAGGGAACCGTGCAGTTTGTGATAACCAACCCGGCGCAATTTGTC
CAACTGAACAGCCATGCGCCGCTGCGCTGGTTAGCTTCCCTGCGTTCCACGCGCGATGGGAAAGCGGTGAGCAATGTTAT
TGGCAGCGTGATTTTGACCCGGCGCGATAGCGGCATCACCACGGCGCATGATCTCATCGGTAAGACAGTCGGCGCGATTG
ATGCTCAGGCGTTTGGCGGCTATTTATTAGGCTATAAAGCGCTCAGCGACGCGGGCTTACGCCCGGAGCGCGATTTTCAT
CTTCGTTTTACCGGATTTCCTGGCGATGCCTTAATCTATATGCTGCGCGAAAAAGCGGTGCAGGCGGCAATTGTGCCAGT
GTGCCTGTTAGAAAATATGGATCAGGAAGGATTGATTAATAAAAAGGACTTTATCGCGCTGCTTTCCCGACCGACGCCCC
TGCCTTGCTTAACCAGTACGCCGTTATATCCTGACTGGTCGTTCGCGGCGCTACCTGCGGTAAGCGATGCGCTGGCGGAT
CGCGTAACGCGAGCGCTATTCAACGCGCCCGCCGCCGCGTCATTTCACTGGGGCGCGCCAGCGTCGACCAGTCAGGTGGA
AGCGTTGCTGCGTGATGTTCGTCAGCACCCTCAGCAGCGTCGACTGTGGCTGGATGTCAAAAGTTGGTTAATCCAGCACC
AGCTAATGGTCGGCGGCGTGATTTTGGCGTTCCTGTTGCTCACGCTCAATTATATTTGGGTCATGCTGCTGGTGCGTCGA
CGTGGAAAGCAACTGGAACGTAATAGCGTAGTTCTTCATCAGCATGAGCGGGCGCTGGAAACCGCCCGGCAAATGAGCGT
GTTGGGTGAAATGACCTCCGGGTTTGCCCATGAGCTTAATCAGCCGCTTTCCGCGATTCGACATTATGCCCAGGGGTGCC
TGATTCGACTGCGCGCTGCAGATGAACAGCATCCCTTGCTGCCGGCGCTGGAGCAGATTGACCAGCAGGCGCAACGCGGT
GCGGATACTCTGCGTAACCTGCGTCACTGGGTCAGCCAGGCGCAGGGCAACCCGGTGCTAACCGAAGCGTGGAAGGCCAT
AGCCATTCGCGAGGCGATTGATCATGTCTGGCAATTGTTGCGTATGGCGCAACAATTTCCGACAGTGACTCTGCATACCG
AGGTTAGCGCTGCGCTGCGCGTAACGCTGCCGTCAGTGCTGCTGGAACAGGTGCTGGCGAATATCATTCTTAATGCGGCT
CAGGCGGGCGCCACCCATTTATGGGTCGTTGCTGAACGCACTGAAAACGGCATCAGTATTGTTTTACAGGATAACGCCGG
GGGAATCGACGAGGCGCTATTACGTCAGGCGTTTCAGCCGTTTATGACCACCCGTAAAGAGGGGATGGGCTTAGGGCTGG
CGATTTGCCAGCGGCTGGTGCGGTATGGGCGGGGCGATATCAGCATCAGGAACCAGACCGCGCCGGACGGTCTGTCGGGA
ACGGTGGTCACGATACATTTCTTACATGAACATGGGGGCAGGGATGGCGACAATTCATCTACTGGATGA

Protein sequence :
MLAAVGLLCHGAWAGTWNIGILAMRGEASTRSHWQPLAKTLSQQLPGETFHIQPLDLHQMQEAVNQGTVQFVITNPAQFV
QLNSHAPLRWLASLRSTRDGKAVSNVIGSVILTRRDSGITTAHDLIGKTVGAIDAQAFGGYLLGYKALSDAGLRPERDFH
LRFTGFPGDALIYMLREKAVQAAIVPVCLLENMDQEGLINKKDFIALLSRPTPLPCLTSTPLYPDWSFAALPAVSDALAD
RVTRALFNAPAAASFHWGAPASTSQVEALLRDVRQHPQQRRLWLDVKSWLIQHQLMVGGVILAFLLLTLNYIWVMLLVRR
RGKQLERNSVVLHQHERALETARQMSVLGEMTSGFAHELNQPLSAIRHYAQGCLIRLRAADEQHPLLPALEQIDQQAQRG
ADTLRNLRHWVSQAQGNPVLTEAWKAIAIREAIDHVWQLLRMAQQFPTVTLHTEVSAALRVTLPSVLLEQVLANIILNAA
QAGATHLWVVAERTENGISIVLQDNAGGIDEALLRQAFQPFMTTRKEGMGLGLAICQRLVRYGRGDISIRNQTAPDGLSG
TVVTIHFLHEHGGRDGDNSSTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrS CAB37413.1 TtrS Virulence SPI-2 Protein 0.0 99
ttrS NP_460351.1 sensory histidine kinase Virulence SPI-2 Protein 0.0 99
ttrS NP_805057.1 hypothetical protein Virulence SPI-2 Protein 0.0 99
ttrS YP_216394.1 tetrathionate reductase complex: sensory transduction histidine kinase Virulence SPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13460 YP_005216904.1 Sensory histidine kinase VFG0487 Protein 0.0 99