Gene Information

Name : STBHUCCB_13380 (STBHUCCB_13380)
Accession : YP_005216898.1
Strain : Salmonella enterica P-stx-12
Genome accession: NC_016832
Putative virulence/resistance : Virulence
Product : Amino acid transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1315394 - 1316737 bp
Length : 1344 bp
Strand : -
Note : similar to D-alanine/D-serine/glycine permease PRK11049; similar to Amino acid transporter of Enterobacteriaceae UniRef RepID=B5FIL7_SALDC

DNA sequence :
ATGAAAAAAGTCAAAAAATTGTCTCTTACCGATTTAGTGCTTTATGGTCTGGTGTTTATGGTGCCTATCGCACCAGTCTC
TCTTTATGGCGTCGTTTATAATCTTTCGCACGGTATGGTTGCGCTGGTTTATATTATTGGCGCTATCGCGATGTTTTTTA
CCGCGTACAGCTACTCTACCTTATCGCAGCATATCTCCTCGTCGGGTTCGGCCTATGCGTATGCTGGCGTATGCATTAAT
CCCGCCGTAGGGTTTCTGACCGGATGGATATTACTGCTGGATTATCTTTTGTTCCCTACGCTCGTAGCGGTGCTGGGCGG
TGTCGCGGTCCACGCTATTTTACCGCAAATCCCGGTCTGGGTCTGGCCGTTGATTTATGTGGCTATTGGCACCGGAGTCA
ACTATCTCGGGATACAGCAAACGGCGAAATTCGATAAGTTACTGGTCTTTATTCAACTCGGTATTCTGGCGATTTTCGTG
CTACTCATTATCCGTCTGATGATGCAGGACAGTAGTCAGATAACGCTTTCCTTCCGGCCTTTTTTCGATTCACAGTGGTT
CACCCCTGGGCTCATCGCAACGGCGATTTCGGTGGCTGCGCTGAATTTTCTCGGCTTTGACGCTATCAGTACATTAAGTG
AAGAAAGCGAAGGCGGGGGACGCGCCGTCAGTAAAGCAACACTGTTGGCGTTAGTTTTGGCGACGGTACTGTTTATTATC
GTTGTGGCGTTTGCGGCGTTCGCCACCGGTAACGTCGACCGCTTCGCGGAAGGTAATGCGACGAATGAAGCATTTTTCAC
CATTGCCGGCAACGTTGGCGGTATCTGGCTCAAAGTGGCGTTTTCCATCATTGTGGCGTTTGTGTGCGCCGTCGGCAACA
TTATTACCGCGCAAACGGCGGTGTCCAGAGTGTTATTTTCAATGGGGCGCGACCGAATGTTGCCCGCCTTCCTCGCTCAC
GTCCATACCACGCGTAAAACGCCGGATTATGCCATTCTGTTTACCGGCGGCGTCACCCTGCTGCTCAGCTACCTGTTTTC
CGGCAAGATTGAATCTATCTCCACGCTGGTGAACTTTGGCGCGCTTTTCGCTTTTTTTGTCGTGAACCTGTGTGTGTTTA
TCCTGTTCAATTTCCGGATGAAAGCCCAGCGGCGCATTTTCGCCCATGTCATTTCGCCGATCATGGGGATGATCGTCATC
GGCTACGTCTGTTTAAACATGAACATTCACGCTCTGATACTCGGAATTAGCTGGGCGGCGATCGGGATAGCGATACTGTG
CTACCGAAAAGCATACAACCAAAACATCGCCATCGACCTGGAAGGCAAAAAGTTGCTCGATTGA

Protein sequence :
MKKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCIN
PAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFV
LLIIRLMMQDSSQITLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFII
VVAFAAFATGNVDRFAEGNATNEAFFTIAGNVGGIWLKVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPAFLAH
VHTTRKTPDYAILFTGGVTLLLSYLFSGKIESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRIFAHVISPIMGMIVI
GYVCLNMNIHALILGISWAAIGIAILCYRKAYNQNIAIDLEGKKLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 6e-179 100
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 6e-179 100
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 6e-177 99
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 6e-177 99
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 9e-173 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STBHUCCB_13380 YP_005216898.1 Amino acid transporter VFG0480 Protein 3e-177 99