Gene Information

Name : xerD (SPUL_3043)
Accession : YP_005214146.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Unknown
Product : site-specific integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3056041 - 3056937 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
ATGGAACAGGATTTAGCGCGTATTGAGCAGTTTCTGGATGCCCTGTGGCTGGAACGAAATCTGGCGGAAAATACATTAAG
CGCGTATCGTCGCGATTTATCGATGGTCGTTGCGTGGTTGCATCATCGCGGAAAAACGCTTGCGACGGCGCAGGCTGATG
ATTTACAAACGCTATTGGCTGAACGGGTGGAGGGCGGATACAAAGCGACCAGCTCCGCACGCCTGTTAAGCGCTATGCGG
CGCTTTTTCCAGCATCTGTACCGTGAAAAGTATCGTGAGGATGATCCGAGCGCGCAGTTGGCCTCGCCTAAGCTTCCGCA
GCGTTTACCGAAAGATCTTAGCGAGGCGCAGGTTGAACGGCTCTTGCAGGCGCCGCTTATTGATCAACCTTTGGAGCTGC
GCGATAAAGCTATGTTGGAAGTGCTGTATGCCACCGGTTTGCGCGTGTCGGAACTGGTGGGGCTGACAATGAGCGATATC
AGTCTGCGGCAGGGCGTGGTGCGGGTTATCGGTAAAGGCAATAAAGAGCGGTTGGTGCCGTTAGGTGAAGAGGCGGTATA
TTGGCTGGAAACGTATCTGGAGCATGGGCGTCCCTGGTTACTCAATGGCGTATCGATTGACGTATTATTCCCCAGCCAGC
GTGCGCAGCAGATGACGCGGCAGACCTTCTGGCACCGTATTAAACATTATGCGGTACTGGCTGGAATCGATAGCGAAAAA
CTATCGCCGCATGTTTTACGTCACGCTTTCGCCACGCATTTGCTGAATCACGGTGCCGACTTGCGCGTTGTACAAATGCT
ACTTGGGCATAGCGATCTTTCGACGACACAAATTTATACGCATGTCGCAACGGAGCGTTTGCGTCAACTTCATCAACAGC
ACCATCCGCGGGCATGA

Protein sequence :
MEQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATAQADDLQTLLAERVEGGYKATSSARLLSAMR
RFFQHLYREKYREDDPSAQLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-62 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-62 54