Gene Information

Name : spaO (SPUL_2888)
Accession : YP_005213999.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein (associated with type III secretion and virulence)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2896259 - 2897170 bp
Length : 912 bp
Strand : -
Note : -

DNA sequence : 
ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCA
GGAAGCTACGCTGGAATATCCGACGCGACAAGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCGTGGA
TTCAACCTGGGGACTGGCTTGAGCATGTCTCTCCCGCTCTGGCGGGGGCGGCGGTTTCTGCTGGCGCTGAGCACCTGGTC
GTTCCCTGGCTTGCTGCGACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA
CCCCGTGCCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAATATC
TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT
ACGCAGCGTTCGTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA
CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG
AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAATCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT
AAGAGCGTTACCCTCGCCGAACTCGAAGCCATGGGGCAGCAACAGCTATTATCACTGCCGACCAATGCTGAACTTAACGT
TGAAATTATGGCGAATGGTGTTTTGCTGGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG
AATGGCTGAGCGAGTCTGGTAATGGGGAATGA

Protein sequence : 
MSLRVRQIDRREWLLAQTATECQRHGQEATLEYPTRQGMWVRLSDAEKRWSAWIQPGDWLEHVSPALAGAAVSAGAEHLV
VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEYLPELPAVGGGRPKMLRWPLRFVIGSSD
TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR
KSVTLAELEAMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaO NP_457285.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 1e-125 99
spaO NP_806494.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 1e-125 99
spaO YP_217810.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 1e-125 99
spaO NP_461812.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 3e-126 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaO YP_005213999.1 surface presentation of antigens protein (associated with type III secretion and virulence) VFG0552 Protein 1e-126 99