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Name : gabD (SPUL_2785) Accession : YP_005213904.1 Strain : Salmonella enterica RKS5078 Genome accession: NC_016831 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2802420 - 2803772 bp Length : 1353 bp Strand : + Note : - DNA sequence : ATGCAACTTAACGACTCTACCCTGTTCCGCCAGCAGGCCTTTATCGATGGCGACTGGCGCGACGCGCGCGGCGGCGATGT CATCCCCGTGAGCAACCCCGCCAACGGGAAACCGCTCGGCAATGTGCCCAAAATGGGGGCGGAAGAGACGCGCGACGCCA TCAACGCCGCCAATCGCGCCCTGCCCGCCTGGCGCGCGCTCACCGCCAAAGAGCGAGCCAATATCCTGCGTCGCTGGTTC AATCTGATGATGGAACATCAGGACGATTTGGCGCATCTGATGACGCTGGAACAGGGTAAACCGCTGGCGGAAGCGAAAGG CGAAATTAGCTACGCCGCCTCGTTTATTGAATGGTTCGCCGAAGAGGGGAAGCGTATCTATGGCGACACGATTCCAGGTC ATCAGGCCGATAAACGGCTGCTGGTGATTAAACAGCCCATCGGCGTCACCGCCGCGATTACCCCGTGGAACTTTCCCTCA GCAATGATCACCCGTAAAGCCGGCCCCGCGCTGGCCGCAGGCTGCACGATGGTACTCAAACCCGCCAGCCAGACGCCGTT TTCCGCGCTGGCGCTGGCGGAACTGGCCCGGCGCGCCGGAATTCCCGCAGGTGTATTTAACGTAGTTACCGGTTCGGCAG GCGATATCGGCGGCGAGCTGACCAGCAACCCGCTGGTACGCAAACTGTCGTTTACCGGCTCGACGGAGATTGGCCGCCAG CTAATGGAACAATGCGCCAAAGACATTAAAAAAGTGTCGCTGGAATTGGGCGGCAATGCGCCGTTTATCGTCTTTGACGA TGCCGATCTGGATAAAGCCGTCGAAGGCGCGCTGGCTTCGAAGTTTCGCAACGCCGGGCAGACCTGTGTCTGCGCCAATA GATTGTATGTTCAGGACGGCGTTTACGATCGTTTTGCGGAAAAACTCAACCAGGCGGTAAATAAGCTCGCGGTCGGCGAC GGCCTGCAAGCCGACGTCGCTATCGGGCCGCTGATTGATGAAAAAGCCGTGGCGAAAGTCCAGGAGCATATCGCCGACGC GCTGGAAAAAGGCGCCCGCGTCATTACGGGCGGTGAAGCGCACAAATTGGGCGGCAACTTCTTTCAACCGACCATTCTGG CGGATGTTCCTGATAACGCGAAAGTCGCCAAAGAAGAGACATTCGGGCCGCTCGCGCCTCTGTTCCGCTTCAGCGACGAG GCGGATGTCATCAGACAGGCTAACGATACCGAGTTCGGCCTGGCAGCCTATTTTTATGCACGCGATTTAAGCCGCGTTTT CCGCGTCGGCGAAGCGCTGGAATACGGCATCGAAGATTATTTAGAAATCAAATATATGTGCATCGGCCTTTAA Protein sequence : MQLNDSTLFRQQAFIDGDWRDARGGDVIPVSNPANGKPLGNVPKMGAEETRDAINAANRALPAWRALTAKERANILRRWF NLMMEHQDDLAHLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLLVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPFSALALAELARRAGIPAGVFNVVTGSAGDIGGELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLNQAVNKLAVGD GLQADVAIGPLIDEKAVAKVQEHIADALEKGARVITGGEAHKLGGNFFQPTILADVPDNAKVAKEETFGPLAPLFRFSDE ADVIRQANDTEFGLAAYFYARDLSRVFRVGEALEYGIEDYLEIKYMCIGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-141 | 62 |
