Gene Information

Name : SPUL_1705 (SPUL_1705)
Accession : YP_005212873.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : type III secretion system, secreted effector protein (SopE)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1716882 - 1717604 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence : 
GTGACAAAAATAACTTTATTTCCCCATAACTTTAGAATCCAAAAACAGGAAACCACACCACTAAAAGAAAAATCAACCGA
GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATCAAATTAAATTCAAAATTATCGGAACGTTTTA
TTTCGCATAAGAACACTGAATCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT
AAAGTCGTTAAAAACTTTATGCTTCAAACGCTCCATGATATAGATATTAGAGGTAGCGCGAGTAAAGACCCCGCATACGC
CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGTATAAAGATCAGTATTGTAACTTGCTCATCAGCAAAG
GAATCGACATAGCGCCTTTTCTTAAGGAAATTGGCGAGGCTGCGCAAAATGCAGGTCTGCCCGGAGCAACCAAGAATGAC
GTTTTTACGCCAAGCGGCGCAGGAGCCAATCCTTTTATAACTCCGTTGATTACATCAGCATACAGTAAGTATCCACATAT
GTTTACCAGTCAACATCAGAAGGCATCCTTTAACATCTATGCGGAGAAGATCATTATGACAGAAGTTGTACCGCTGTTTA
ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACAAATACTAGAAAACATTGCTAATAAATATATCCCAAACACTCCC
TGA

Protein sequence : 
MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTN
KVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKND
VFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIPNTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 6e-98 90
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 6e-98 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUL_1705 YP_005212873.1 type III secretion system, secreted effector protein (SopE) VFG0467 Protein 6e-79 66