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Name : hofB (SPUL_0153) Accession : YP_005211434.1 Strain : Salmonella enterica RKS5078 Genome accession: NC_016831 Putative virulence/resistance : Virulence Product : protein transport protein HofB Function : - COG functional category : - COG ID : - EC number : - Position : 167920 - 169305 bp Length : 1386 bp Strand : - Note : - DNA sequence : ATGAAAGACGCTCAGCTCAACACCTTGTGTCAACGTCATCAGGCTGTACTGATCAATAGCGCCAGCAACAGTATCACTGT TGCGGTGGTCGACGCGCCCTCTCATGCGTTACTGGACGCTCTGCATTTCGCCACGCAAAAACAGATTGATATTGTGTGCT GGACTCGCCAGCAAATGGAAAATCATCGGCATAAGCCGGATCAGGCACCCTCGGCAAACGCCGCGAAAGGCGGAGAAACC GCAGCCCAGCTTCTCAATCAGACATTACGCTCGGCGATGGCGAAACGCGCCTCTGATATCCATCTCGAACCCGGCGCCAG CCGCTACCGAATAAGACTCCGCATCGACGGCGTTCTTCATATTCTGCAGGACATCGCCAAAGAGACGGGGCTTGCGCTGA CGGCCAGATTGAAAGTCCTGGGAAATTTGGACATCGCTGAACATCGACTGCCGCAGGACGGGCAATTTACCGTTGACCTG GCGGGCGACAGCATCTCTTTTCGTATCGCCACGCTTCCCTGTAAAGAAGGCGAAAAAGTCGTCTTACGGTTGTTGCATCA GGTTGAACAAACGCTGGATCTGGACACGCTGGGCATGTACGGGGCACAACTTACCGCTTTTAGACAAGCCCTACAGCAAC CTCAGGGGCTGGTACTGGTGACTGGCCCCACCGGTAGCGGAAAAACGGTCACGCTATACAGCGCGCTACAAACCCGGAAT ACGCCGGGTATCAACCTCTGTAGCGTTGAGGATCCGATAGAAATTCCACTGGATGGGATTAACCAGACGCAGATCCATCC CCGCGCCGGGCTCACCTTTCAAAATGTGCTGCGTGCGCTATTACGCCAGGACCCTGACATCATCATGGTAGGTGAAATTC GTGACGGCGACACCGCAGAAATCGCCATTAAGGCGGCACAAACGGGCCATCTGGTACTTTCAACGCTACATACGAACTCC ACCAGTGAAACCCTGATACGTTTGCAGCAAATGGGCGTAGCACGCTGGATGATCTCATCGGCGCTTACGCTGGTGGTAGC GCAACGCCTGGTAAGGAAGCTTTGCCCGCACTGCAAACAGCGCCTGAGCGATCCCGTAGTGCTATCGCCCAATCTTTGGC CCAGCGCGCTACCGCGCTGGCAGGCAAACGGCTGTCAGCATTGCTACCACGGCTTTTATGGCCGAACCGCGTTATTCGAA GTGTTAACCGTTACCCCGGCATTACGTCAGTTAATTGCGAGCGGCGCATCGGCGCAAGCACTGGAAGCCCACCTCCAACA GACCGGTACAGGGACGCTTTTTGAAAATGGCTGTCGCGCCGTTGAGCAAGGCATGACGTCCTTTGAAGAGATACTGCGCG TTCTGGGAATGCCCCATGAGCGTTAA Protein sequence : MKDAQLNTLCQRHQAVLINSASNSITVAVVDAPSHALLDALHFATQKQIDIVCWTRQQMENHRHKPDQAPSANAAKGGET AAQLLNQTLRSAMAKRASDIHLEPGASRYRIRLRIDGVLHILQDIAKETGLALTARLKVLGNLDIAEHRLPQDGQFTVDL AGDSISFRIATLPCKEGEKVVLRLLHQVEQTLDLDTLGMYGAQLTAFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTRN TPGINLCSVEDPIEIPLDGINQTQIHPRAGLTFQNVLRALLRQDPDIIMVGEIRDGDTAEIAIKAAQTGHLVLSTLHTNS TSETLIRLQQMGVARWMISSALTLVVAQRLVRKLCPHCKQRLSDPVVLSPNLWPSALPRWQANGCQHCYHGFYGRTALFE VLTVTPALRQLIASGASAQALEAHLQQTGTGTLFENGCRAVEQGMTSFEEILRVLGMPHER |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-70 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-70 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hofB | YP_005211434.1 | protein transport protein HofB | VFG2048 | Protein | 7e-72 | 47 |
| hofB | YP_005211434.1 | protein transport protein HofB | VFG2426 | Protein | 3e-70 | 45 |
| hofB | YP_005211434.1 | protein transport protein HofB | VFG0182 | Protein | 2e-73 | 44 |
| hofB | YP_005211434.1 | protein transport protein HofB | VFG1876 | Protein | 6e-75 | 44 |
| hofB | YP_005211434.1 | protein transport protein HofB | VFG0112 | Protein | 2e-77 | 44 |
| hofB | YP_005211434.1 | protein transport protein HofB | VFG0233 | Protein | 3e-68 | 43 |
