Gene Information

Name : ssaT (SPUL_1237)
Accession : YP_005212446.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1265028 - 1265807 bp
Length : 780 bp
Strand : +
Note : -

DNA sequence :
ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGCGGCTTTTATTCGACCATTGAGCCTCTCTTTATTACTTCC
CCTATTAAAAAGTGGCAGTTTAGGGTCCGCGATTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGCTGGTTAGGGTTAGTCACCGGAGAGGTGATTATT
GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG
CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGATT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCCTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGCGGTAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA

Protein sequence :
MAQQVNEWLIALAAAFIRPLSLSLLLPLLKSGSLGSAILRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDQQFLKYIQAEWRTLYQLCIRFSLPAIICMVLADLALGLLNRSAQQLNVFFLSMPLKSILVLLTLLISFPYALHH
YLVESGKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 3e-99 99
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 4e-98 98
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 6e-98 98
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 5e-98 97
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 5e-98 97
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 1e-45 52
escT AFO66402.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-24 41
escT AFO66312.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaT YP_005212446.1 putative type III secretion protein VFG0521 Protein 2e-98 98