Gene Information

Name : ssaO (SPUL_1232)
Accession : YP_005212441.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1262368 - 1262745 bp
Length : 378 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCGGCAAGCTTACCGTACTTGATCAGCAGCAACA
GGCGATTATTACGGAACAGCAGATTTGCCAGACGCGCGCTTTAGCAGTGTCTACCAGACTGAAAGAATTAATGGGCTGGC
AAGGTACGTTATCTTGTCATTTATTGTTGGATAAGAAACAACAAATGGCCGGGTTATTCACTCAGGCGCAGAGCTTTTTG
ACGCAACGGCAGCAGTTAGAGAATCAGTATCAGCAGCTTGTCTCCCAGCGAAGCGAATTACAGAAGAATTTTAATGCGCT
TATGAAAAAGAAAGAAAAAATTACTATGGTATTAAGCGATGCGTATTACCAAAGTTGA

Protein sequence : 
METLLEIIARREKQLRGKLTVLDQQQQAIITEQQICQTRALAVSTRLKELMGWQGTLSCHLLLDKKQQMAGLFTQAQSFL
TQRQQLENQYQQLVSQRSELQKNFNALMKKKEKITMVLSDAYYQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaO NP_460381.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-35 99
ssaO CAA70538.1 secretion system apparatus Virulence SPI-2 Protein 3e-35 99
ssaO YP_216424.1 secretion system apparatus protein SsaO Virulence SPI-2 Protein 2e-35 99
ssaO NP_805087.1 type III secretion protein Virulence SPI-2 Protein 9e-35 98
ssaO AAX49618.1 SsaO Virulence SPI-2 Protein 2e-29 98
ssaO NP_456112.1 putative type III secretion protein Virulence SPI-2 Protein 9e-35 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaO YP_005212441.1 putative type III secretion protein VFG0516 Protein 1e-35 99