Gene Information

Name : ssaJ (SPUL_1225)
Accession : YP_005212434.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : putative pathogenicity island lipoprotein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1255710 - 1256399 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
GTGGATCTTTATCGCTCATTGCCAGAGGATGAGGCGAATCAAATGCTGGCATTACTTATGCAGCATCATATTGATGCGGA
AAAAAAACAGGAAGAGGACGGTGTTACCTTACGTGTCGAGCAGTCGCAGTTTATTAATGCGGTTGAGCTACTTAGACTTA
ACGGTTATCCGCATCGTCAGTTTACAACGGCGGATAAGATGTTTCCGGCTAATCAGTTAGTGGTATCACCCCAGGAAGAA
CAGCAGAAGATTAATTTTTTAAAAGAACAAAGAATTGAAGGAATGCTGAGTCAGATGGAGGGCGTGATTAATGCAAAAGT
GACCATTGCGCTACCGACTTATGGTGAGGGAAGTAACGCTTCTCCGAGCTCAGTTGCCGTATTTATAAAATATTCACCAC
AGGTCAATATGGAGGCCTTTCGGGTAAAAATTAAGGATTTAATAGAGATGTCAATCCCTGGGTTGCAATACAGTAAGATT
AGTATCTTGATGCAGCCTGCTGAATTCAGAATGGTAGCTGACGTACCCGCGAGACAAACATTCTGGATTATGGACGTTAT
CAACGCCAATAAAGGGAAGGTGGTGAAGTGGTTGATGAAATACCCTTATCAGTTGATGTTATCGTTGACAGGACTGTTAT
TAGGAGTGGGCATCCTGATCGGCTATTTTTGCCTGAGACGCCGTTTTTGA

Protein sequence :
MDLYRSLPEDEANQMLALLMQHHIDAEKKQEEDGVTLRVEQSQFINAVELLRLNGYPHRQFTTADKMFPANQLVVSPQEE
QQKINFLKEQRIEGMLSQMEGVINAKVTIALPTYGEGSNASPSSVAVFIKYSPQVNMEAFRVKIKDLIEMSIPGLQYSKI
SILMQPAEFRMVADVPARQTFWIMDVINANKGKVVKWLMKYPYQLMLSLTGLLLGVGILIGYFCLRRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaJ YP_216417.1 secretion system apparatus protein SsaJ Virulence SPI-2 Protein 4e-94 99
ssaJ NP_460374.1 needle complex inner membrane lipoprotein Virulence SPI-2 Protein 1e-94 99
ssaJ NP_456119.1 putative pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ NP_805080.1 pathogenicity island lipoprotein Virulence SPI-2 Protein 7e-95 99
ssaJ CAA70532.1 secretion system apparatus Virulence SPI-2 Protein 7e-95 99
ssaJ CAA12196.1 SsaJ Virulence SPI-2 Protein 2e-74 99
YPO0263 YP_002345344.1 type III secretion system apparatus lipoprotein Virulence Not named Protein 2e-47 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaJ YP_005212434.1 putative pathogenicity island lipoprotein VFG0510 Protein 4e-95 99