Gene Information

Name : sseF (SPUL_1220)
Accession : YP_005212429.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : putative pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1253348 - 1254130 bp
Length : 783 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTCATATTCCGTCAGCGGCAAGTAATATAGTCGATGGTAATAGTCCTCCTTCCGATATACAAGCGAAGGAGGT
ATCGTTTCCTCCCCCTGAAATTCCAGCGCCTGGTACCCCCGCAGCCCCTGTGCTGCTTACGCCTGAACAAATAAGGCAGC
AGAGGGATTATGCTATACATTTTATGCAATACACTATTCGTGCGCTGGGTGCGACAGTCGTGTTTGGGTTATCGGTTGCT
GCAGCGGTAATTTCTGGCGGGGCAGGATTACCCATTGCTATTCTTGCGGGGGCGGCGCTCGTGATTGCTATTGGGGATGC
TTGCTGTGCGTATCATAATTATCAATCGATATGTCAGCAAAAGGAGCCATTACAAACCGCCAGTGATAGCGTTGCTCTTG
TGGTCAGCGCGCTGGCCTTAAAATGTGGGGCAAGTCTTAACTGCGCTAACACCCTTGCTAATTGTCTTTCTTTATTAATA
CGTTCAGGAATCGCTATTTCTATGTTGGTTTTACCCCTACAGTTTCCACTGCCCGCGGCTGAAAATATTGCGGCCTCTTT
GGACATGGGGAGTGTAATTACCTCCGTTAGCCTGACGGCGATAGGTGCGGTACTGGATTATTGCCTTGCCCGCCCCTCTG
GCGACGATCAGGAAAATTCTGTTGATGAACTTTATGCCGATCCCAGTGCGTTATTGGCGGAACAAATGGCAGCGCTCTGT
CAATCTGCTACTGCACCTGCATTAATGGACAGTTCTGGTCATACATCTCGGGGAGAACCATGA

Protein sequence : 
MKIHIPSAASNIVDGNSPPSDIQAKEVSFPPPEIPAPGTPAAPVLLTPEQIRQQRDYAIHFMQYTIRALGATVVFGLSVA
AAVISGGAGLPIAILAGAALVIAIGDACCAYHNYQSICQQKEPLQTASDSVALVVSALALKCGASLNCANTLANCLSLLI
RSGIAISMLVLPLQFPLPAAENIAASLDMGSVITSVSLTAIGAVLDYCLARPSGDDQENSVDELYADPSALLAEQMAALC
QSATAPALMDSSGHTSRGEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseF AAC28885.1 SseF Virulence SPI-2 Protein 8e-90 99
sseF NP_460369.1 secreted effector protein Virulence SPI-2 Protein 1e-89 99
sseF CAA12191.1 SseF Virulence SPI-2 Protein 2e-88 99
sseF YP_216412.1 secretion system effector protein SseF Virulence SPI-2 Protein 5e-87 97
sseF NP_456124.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 4e-87 96
sseF NP_805075.1 pathogenicity island effector protein Virulence SPI-2 Protein 4e-87 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseF YP_005212429.1 putative pathogenicity island effector protein VFG0505 Protein 5e-90 99