Gene Information

Name : SPUL_1196 (SPUL_1196)
Accession : YP_005212409.1
Strain : Salmonella enterica RKS5078
Genome accession: NC_016831
Putative virulence/resistance : Virulence
Product : putative amino acid permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1227150 - 1228493 bp
Length : 1344 bp
Strand : -
Note : orf48

DNA sequence :
ATGAAAAAAGTCAAAAAATTGTCTCTTACCGATTTAGTGCTTTATGGTCTGGTGTTTATGGTGCCTATCGCGCCAGTCTC
TCTTTATGGCGTCGTTTATAATCTTTCGCACGGTATGGTTGCGCTGGTTTATATTATTGGCGCTATCGCGATGTTTTTTA
CCGCGTACAGCTACTCTACCTTATCGCAGCATATCTCCTCGTCGGGTTCGGCCTATGCGTATGCTGGCGTATGCATTAAT
CCCGCCGTAGGGTTTCTGACCGGATGGATATTACTGCTGGATTATCTTTTGTTCCCTACGCTCGTGGCAGTGCTGGGCGG
CGTCGCGGTCCACGCTATTTTACCGCAAATCCCGGTCTGGGTCTGGCCGTTGATTTATGTGGCTATCGGCACCGGAGTCA
ACTATCTCGGGATACAGCAAACGGCGAAATTCGATAAGTTACTGGTCTTTATTCAACTCGGTATTCTGGCGATTTTCGTG
CTACTCATTGTCCGTCTGATGCTGCTGGACAGTAGTCAAATAACGCTTTCCTTCCGGCCTTTTTTCGATTCACAGTGGTT
CACCCCAGGGCTCATCGCGACGGCGATTTCGGTGGCTGCGCTGAACTTTCTCGGCTTTGACGCTATCAGTACATTAAGTG
AAGAAAGCGAAGGCGGGGGACGCGCCGTCAGTAAAGCAACGCTGTTGGCGTTAGTTTTGGCGACGGTACTGTTTATTATC
GTTGTGGCGTTTGCGGCGTTCGCCACCGGTAATGTCGACCGCTTCGCGGAAGGCAATGCGACGAATGAAGCATTTTTCAC
CATTGCCGGCAACGTTGTCGGTATCTGGCTCAAAGTGGCATTTTCCATCATTGTGGCGTTTGTGTGCGCCGTCGGCAACA
TTATTACCGCGCAAACGGCGGTGTCCAGAGTGCTATTTTCAATGGGGCGCGACCGAATGTTGCCCGCCGTCCTCGCTCAC
GTCCATACCACGCGTAAAACGCCGGATTATGCCATTCTGTTTACCGGCGGCGTCACCCTGCTGCTCAGCTACCTGTTTTC
CGGCAAGACTGAGTCTATCTCCACGCTGGTGAACTTTGGCGCGCTTTTCGCTTTTTTTGTCGTGAACCTGTGTGTGTTTA
TCCTGTTCAATTTCCGGATGAAAGCCCAGCGGCGCATTTTCGCCCATGTCATTTCGCCGATCATGGGGATGATCGTCATC
GGCTACGTCTGTTTAAACATGAACATTCACGCTCTGATACTCGGAATTAGCTGGGCGGCGATCGGGATAGCGATTCTGTG
CTATCGAAAAGCACATAACCAAAACATCGCCATCGACCTGGAAGGCAAAAAGTTGCTCGATTGA

Protein sequence :
MKKVKKLSLTDLVLYGLVFMVPIAPVSLYGVVYNLSHGMVALVYIIGAIAMFFTAYSYSTLSQHISSSGSAYAYAGVCIN
PAVGFLTGWILLLDYLLFPTLVAVLGGVAVHAILPQIPVWVWPLIYVAIGTGVNYLGIQQTAKFDKLLVFIQLGILAIFV
LLIVRLMLLDSSQITLSFRPFFDSQWFTPGLIATAISVAALNFLGFDAISTLSEESEGGGRAVSKATLLALVLATVLFII
VVAFAAFATGNVDRFAEGNATNEAFFTIAGNVVGIWLKVAFSIIVAFVCAVGNIITAQTAVSRVLFSMGRDRMLPAVLAH
VHTTRKTPDYAILFTGGVTLLLSYLFSGKTESISTLVNFGALFAFFVVNLCVFILFNFRMKAQRRIFAHVISPIMGMIVI
GYVCLNMNIHALILGISWAAIGIAILCYRKAHNQNIAIDLEGKKLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 4e-175 99
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 6e-177 99
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 6e-177 99
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 8e-173 99
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 4e-175 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SPUL_1196 YP_005212409.1 putative amino acid permease VFG0480 Protein 3e-177 99