|
Name : PSF113_0947 (PSF113_0947) Accession : YP_005206371.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 1139700 - 1140674 bp Length : 975 bp Strand : - Note : - DNA sequence : ATGAGCCAATCCAGCGACCTGATTCAATCGGCACAACGTACCATCCGCCTCGAGCAGCAAGCCGTGCAAGGCTTGCTGCC CCATATCGACGCTGATTTCGTACGCGCCTGCGAGATGATTCTGGCCAGCAAAGGCCGCGTGGTCGTGGTCGGCATGGGCA AGTCCGGGCACATCGGCAACAAGATCGCCGCCACCCTCGCCAGCACCGGCACCACGGCCTTTTTCGTCCATCCGGCCGAA GCCAGCCACGGCGACATGGGCATGATTACCCGGGACGACGTCATCCTGGCCCTATCCAACTCCGGCTCCACCAATGAGAT CATCACGCTGCTGCCGCTGATCAAGCGCCTGGGCATCCAGTTGATCAGCATGACCGGCAATCCGGACTCGCCGCTGGCCA AGGCCGCCGAAGTAAACCTCAATGTTCATGTCGAACACGAAGCCTGCCCGCTGAACCTGGCACCGACCTCTTCCACCACC GCCGCCCTGGTCATGGGCGACGCCCTGGCCGTGGCGCTGCTGGAAGCCCGGGGCTTCACCGCGGAGGATTTCGCCTTTTC CCATCCCGGTGGCGCCCTCGGCCGTCGCCTGCTGCTGAAAGTCGAAAATGTGATGCACGCCGGCCAGGAGTTGCCGCAAG TGCTGCGCGGCACGCTGCTCAAGGACGCGCTCATGGAGATGACCCGCAAGGGGCTGGGCATGACGGTAGTCCTGGAGGCC GACGGCAAGCTCGCCGGGATCTTCACCGACGGCGACCTGCGCCGCACCCTGGACCGCACCATCGACATCCACAGTGCGAC CATCGAGCAAGTCATGACGCCCCACGGCAAGACCGCCCGCGCCGAGATGCTCGCCGCCGAGGCATTGAAAATCATGGAAG ACCACAAGATCAGCGCCCTGGTGGTCGTCGACGACGAAGACCGTCCGGTGGGCGCCCTGAACATGCACGATTTGCTGCGT GCGGGAGTCATGTAA Protein sequence : MSQSSDLIQSAQRTIRLEQQAVQGLLPHIDADFVRACEMILASKGRVVVVGMGKSGHIGNKIAATLASTGTTAFFVHPAE ASHGDMGMITRDDVILALSNSGSTNEIITLLPLIKRLGIQLISMTGNPDSPLAKAAEVNLNVHVEHEACPLNLAPTSSTT AALVMGDALAVALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVLRGTLLKDALMEMTRKGLGMTVVLEA DGKLAGIFTDGDLRRTLDRTIDIHSATIEQVMTPHGKTARAEMLAAEALKIMEDHKISALVVVDDEDRPVGALNMHDLLR AGVM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-58 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-58 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 5e-58 | 45 |
