Gene Information

Name : coxA (PSF113_0089)
Accession : YP_005205522.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : protein CoxA
Function : -
COG functional category : -
COG ID : -
EC number : 1.9.3.1
Position : 99479 - 101065 bp
Length : 1587 bp
Strand : -
Note : Cytochrome c oxidase polypeptide I

DNA sequence :
ATGAGTGCTGTGATCGATGACCACGGTCATGCCGACCACGCCCACGGCCCCGCCAAGGGCCTGATGCGCTGGGTACTGAC
CACCAACCACAAGGATATCGGCACGCTGTACCTGTGGTTCGCCTTCTCCATGTTCCTGTTGGGCGGCTCGTTCGCCATGG
TGATCCGCGCCGAGCTGTTCCAGCCCGGCCTGCAGATCGTGCAGCCGGAATTCTTCAACCAGATGACCACCATGCATGGC
CTGGTGATGGTCTTCGGCGCAGTCATGCCGGCGTTCGTCGGCCTGGCCAACTGGATGATCCCGCTGATGATCGGCGCGCC
GGACATGGCCCTGCCGCGCATGAACAACTTCAGCTTCTGGCTGTTGCCGGCGGCGTTCCTGCTGCTGGTCTCGACGCTGT
TCACCCCTGGAGGCGGGCCGAACTTCGGTTGGACCTTCTATGCGCCGCTGTCCACCACCTATGCGCCGGAAAGCGTGACG
TTCTTCATCTTTGCCATCCACCTGATGGGCATCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCATCCTCAACCT
GCGCGCCCCCGGCATGACCCTGATGAAAATGCCACTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTGCTGATCGCAG
TGATGCCGGTGCTGGCCGGCTGCGTGACGATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAGTGCCGCCGGC
GGCGGTGACCCGGTGCTGTTCCAGCACGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCTGCCGGCCTT
CGGTGCCGTCAGCTCGATCATCCCGGCGTTCTCGCGCAAGCCGTTGTTTGGCTACACCTCGATGGTCTACGCCACGGCCG
CCATTGCGTTCCTGTCGTTCATCGTCTGGGCGCACCACATGTTCGTGGTTGGCATTCCGCTGGTGGGCGAACTGTTCTTC
ATGTACGCCACCCTGCTGATCGCCGTGCCCACCGGAGTGAAGGTGTTCAACTGGGCCAGCACCATGTGGCAAGGCTCGCT
GACCTTCGAGACGCCGATGCTGTTTGCCGTGGCGTTCGTGATCCTGTTTTCCATCGGTGGTTTCTCCGGGCTGATGCTGG
CCATCGCCCCGGCGGACTTCCAGTACCAGGACACCTACTTCGTGGTCGCGCACTTCCACTACGTGCTGGTGCCCGGTGCG
ATCTTCGGGATCTTCGCCTCGGCCTACTACTGGCTGCCGAAGTGGACCGGCCACATGTACGACGAAACCCTCGGCAAACT
GCACTTCTGGCTGTCGTTCGTGGGGATGAACCTGGCGTTCTTCCCGATGCACTTCGTCGGCCTGGCGGGCATGCCCCGGC
GGATTCCCGACTACAACCTGCAGTTCGCCGACTTCAACATGGTCTCGTCCATCGGCGCATTCATGTTCGGCACCACGCAG
ATCTTCTTCCTGTTCATCGTGATCAAGACCATCCGTGGCGGCGAGCCGGCACCGGCCAAACCGTGGGATGGGGCCGAAGG
GCTGGAGTGGAGCGTGCCTTCGCCGGCGCCGTATCACACCTTCACTACGCCGCCGGAAGTGAAATAG

Protein sequence :
MSAVIDDHGHADHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFSMFLLGGSFAMVIRAELFQPGLQIVQPEFFNQMTTMHG
LVMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTPGGGPNFGWTFYAPLSTTYAPESVT
FFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAAG
GGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATAAIAFLSFIVWAHHMFVVGIPLVGELFF
MYATLLIAVPTGVKVFNWASTMWQGSLTFETPMLFAVAFVILFSIGGFSGLMLAIAPADFQYQDTYFVVAHFHYVLVPGA
IFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNLAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGTTQ
IFFLFIVIKTIRGGEPAPAKPWDGAEGLEWSVPSPAPYHTFTTPPEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 6e-99 48