Gene Information

Name : PSF113_0628 (PSF113_0628)
Accession : YP_005206059.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : ABC transporter permease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 749073 - 750083 bp
Length : 1011 bp
Strand : -
Note : -

DNA sequence :
ATGAACGGTCATCGCTACGGCGCCCTGCTGATGGTCCTCGGCGCACTGCTGCTGGTGTCGTGCGTGGTGTCCCTGGGTTT
CGGGCCGGCGCGGGTGCCGGTGGCCGTGGTCTGGGACATCCTGCTGAACAAGGCCTTCGGAGTGGGTGACGTGCATTGGA
CGCCCGGCCAGGAGCATATCGTCTGGCTGATCCGCGTCCCGCGGCTGCTGCTCGGTGCCTTGGTCGGCGCCGGGCTGGCG
TTGATCGGTGCGGTGCTGCAAGCGGTGACGCGCAACCCGCTGGCTGACCCGCACCTGCTGGGCGTCACCTCTGGCGCGAC
TCTGGGAGCGGTGATCGTGGTGCTGCATGTCGGCGAGATTGTCGGCTTGCTGACCCTGCCGCTGGCGGCGTTCATCGGCG
CGCTGCTGAGCATGCTGCTGGTGCTGACCATCGCTGCCCGCCAGGGTCGCCTGGAAAGTGATCGCCTGTTGTTGTGCGGC
GTGGCGGTGTCCTTCGTGATGATGGCGGCGGCCAATCTGTTGTTGTTCCTCGGTGACCATCGCGCCAGTTCGGCAGTGAT
GTTCTGGATGCTCGGCGGCCTGGGCCTGGCCCGCTGGGAACTGCTGGCCGTGCCGGCGGCCAGTGTGGTGCTGGGGCTGG
TGTTGCTGCTGGGCATGGCCCGGCCGCTGAACGCACTGATGGCCGGCGAACAGACCGCCGTGACCCTGGGCCTGAACGCG
GCGAAAGTGCGGTTGTGGATCTTCTTGATTGCCTCGCTGATGACCGGCGTGCTGGTGTCCATCAGCGGCTCGATTGGCTT
TGTCGGGCTGATGGTGCCGCACATTGCCCGGCGCCTGGTGGGCGCCGAGCATCGTCGGTTGCTGCCGGCTTGTGTGCTGC
TTGGCAGCCTGTTCCTGGTGTGGGTGGACGTGGCGGCGCGGACGTTGATCGCCCCGGAAGACTTGCCGATTGGGGTCGCG
ACAGCCGCTATCGGCGGACTGTTTTTCATCGGCCTGATGCGCCGTCGCTGA

Protein sequence :
MNGHRYGALLMVLGALLLVSCVVSLGFGPARVPVAVVWDILLNKAFGVGDVHWTPGQEHIVWLIRVPRLLLGALVGAGLA
LIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEIVGLLTLPLAAFIGALLSMLLVLTIAARQGRLESDRLLLCG
VAVSFVMMAAANLLLFLGDHRASSAVMFWMLGGLGLARWELLAVPAASVVLGLVLLLGMARPLNALMAGEQTAVTLGLNA
AKVRLWIFLIASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPACVLLGSLFLVWVDVAARTLIAPEDLPIGVA
TAAIGGLFFIGLMRRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 8e-23 41
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 8e-23 41
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 8e-23 41