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Name : impC3 (PSF113_5827) Accession : YP_005211196.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein ImpC Function : - COG functional category : - COG ID : - EC number : - Position : 6723361 - 6724836 bp Length : 1476 bp Strand : - Note : Type VI secretion system ImpC DNA sequence : ATGAGTACCCATGCCGTACAACAGCAAAGCCAGGACAACGCTGATTACAGCATTCTTGAGAGCATCATCGCCCAGACTCG CCTGACCCCGGACGATGACGCCTACGACATTGCCAAGCGAGGCGTCTCTGCGTTCATCGAAGAGTTGCTCAAGCCGCAAA ACAGCGGTGAGCCGGTCAAGAAGGCCATGGTCGACCGCATGATCGCCGAGATCGACGCCAAGCTCAGTCGCCAGGTGGAC GAAATCCTCCATCACCCACAATTCCAGGCCCTGGAGTCGGCATGGCGCGGTTTGCAGTTGCTGGTGGACCGCACCAACTT CCGCGAAAACATCAAGATAGAAATGCTCAACGTCTCCAAGGACGACTTGCTGGACGACTTCGAGGATTCGCCAGAAGTCA TGCAGTCAGGCCTGTACAAACATATCTACACCGCTGAATACGGTCAGTTCGGTGGGCAGCCGGTGGGTGCGGTCATCGCC AACTACTTCATGTCGCCAAGCTCGCCGGACGTGAAATTGATGCAGTACGTCTCCAGTGTCGCCTGCATGTCCCATGCACC GTTCATCGCCGCGGCAGGTCCGAAATTCTTTGGCTTGGAAAGCTTTACTGGCCTGCCGGACCTCAAGGACCTGAAGGACC ACTTCGAAGGTCCGCAATTCGCCAAGTGGCAGAGCTTTCGTCAATCGGAAGATGCTCGCTATTTTGGTCTGACCGTACCG CGCTTCCTGTTGCGCAACCCCTACGATCCGCAAGAGAACCCGGTCAAGTCATTCGTCTACAAGGAAACCGTAGCCAACAG CCACGAGCACTACCTGTGGGGCAACACGGCATACGCGTTCGGTACAAGGCTGACCGACAGCTTTGCCAAATTCCGCTGGT GCCCGAACATCGTCGGCCCTCAAAGCGGTGGCGCGGTTGAAGACCTGCCGTTGCACCACTTCGAAAGCATGGGTGAGATC GAAACCAAGATCCCGACCGAAGTGCTGGTGTCCGACCGACGCGAGTACGAATTGGCCGAGGAAGGCTTCATCTCCCTGAC CATGCGCAAAGGCAGTGACAACGCCGCGTTCTTCTCGGCCAGTTCCGTGCAGAAGCCGAAGTTCTTTGGTAACGGCGCCG AGGACAAGCATGCCGAGCTGAACTACAAGCTTGGCACTCAGTTGCCCTACATGATGATTGTCAATCGACTGGCTCACTAC TTGAAGGTTCTGCAGCGCGAGCAATTGGGGTCATGGAAGGAGCGCACGGACCTGGAGCGTGAACTCAACAACTGGATTCG CCAATACGTGGCCGACCAGGAGAACCCGAGTGCCGAAGTTCGCGGCCGCCGTCCGCTGCGCGCAGCGAAGATCATTGTCA GCGACGTTGAAGGTGAGCCGGGTTGGTATCGCGTAGGCCTGAACGTACGGCCTCACTTCAAATACATGGGGGCCGATTTC ACGCTGTCGTTGGTTGGCAAGCTGGACAAGGCGTAG Protein sequence : MSTHAVQQQSQDNADYSILESIIAQTRLTPDDDAYDIAKRGVSAFIEELLKPQNSGEPVKKAMVDRMIAEIDAKLSRQVD EILHHPQFQALESAWRGLQLLVDRTNFRENIKIEMLNVSKDDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAVIA NYFMSPSSPDVKLMQYVSSVACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYFGLTVP RFLLRNPYDPQENPVKSFVYKETVANSHEHYLWGNTAYAFGTRLTDSFAKFRWCPNIVGPQSGGAVEDLPLHHFESMGEI ETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSASSVQKPKFFGNGAEDKHAELNYKLGTQLPYMMIVNRLAHY LKVLQREQLGSWKERTDLERELNNWIRQYVADQENPSAEVRGRRPLRAAKIIVSDVEGEPGWYRVGLNVRPHFKYMGADF TLSLVGKLDKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec18 | YP_851426.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 2e-165 | 63 |
| aec18 | AAQ96712.1 | Aec18 | Not tested | AGI-1 | Protein | 2e-165 | 63 |
| HH0247 | NP_859778.1 | hypothetical protein | Not tested | HHGI1 | Protein | 8e-158 | 60 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| impC3 | YP_005211196.1 | protein ImpC | VFG2093 | Protein | 0.0 | 71 |
| impC3 | YP_005211196.1 | protein ImpC | VFG2475 | Protein | 3e-171 | 66 |
