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Name : clpB4 (PSF113_5823) Accession : YP_005211192.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : - COG ID : - EC number : 3.6.1.3 Position : 6717583 - 6720168 bp Length : 2586 bp Strand : - Note : ClpB protein DNA sequence : ATGATCAACGTAGACCTTCAGCAACTGATCCAGGCGTTGGACGCCGAAACCAGAAGCGATCTGTCGCGCTCGGCCGAGCA ATGCGTCGCCCGTGGGGCAGACAAAGTCCTGGTGGAAGACTTGATGCTGGGCTTGCTGGAACGTCCGCAGGGGCTGCTCG CGCGAGCCTTGCAAGATGCCCAGGTAAGCGCAGGTGAACTGAGCGCTGCGCTGCAACCACGGATGGGGCACAGCGCTTCG CGCAATCCGGTATTCGCCCCGGAGCTGGTGCAATGGTTGCAGGATGCACTGCTGGTAGCCAATCTCGAGCTGGGCTGCAG CCAGGTCGGACAAGCCGCGTTGATCCTGGCGTTGCTGCGCAACCCGCTTCGCTATGCAGGGAGTGCTTACCAGGCGCTGC TCACCCGACTGAACGTCGATCGGTTGAAAGATTTCGCCTTGTCGCAACAGACCCACCCGGTAGCCGATCACTCCGCCAAG CCGGACGACTCCCTGCTGGCGCGCTTCACCCATGACCTGACCCGGCAGGCTCGTGAAGGTCAACTCGACCCGGTGCTTTG TCGCGACGGTGAAGTCAGGCAGATGATCGATATCCTCGTTCGTCGCCGCAAAAATAACCCAATCGTGGTCGGTGAAGCAG GGGTGGGCAAGACCGCCATCGTCGAGGGGCTGGCGTTGCGCATCGCCGCCGCAGAAGTACCGTCAGTGCTCGAAGGCGTC GAGCTGCTTTCGCTGGATATGGGGCTCCTGCAGGCCGGCGCCAGCATAAAAGGTGAATTCGAACGTCGTCTCAAAGGGGT GATCGACGAGGTCAAGGCTTCGCCAAAATCCATCATCCTGTTCATCGATGAGGCTCACACCTTGATTGGCGCGGGTGGCA ACGCCGGGGGCGCCGATGCGGCCAACCTGCTCAAGCCGGCCTTGGCCCGGGGTGAGCTGCGTACTATCGCGGCCACCACC TGGGCCGAGTACAAAAAATATTTTGAGAAAGACCCGGCCCTGGCCCGTCGTTTCCAACCGGTGCAATTGCACGAGCCGAC CGTCAGTGAAGCAGTGACCATCCTGCGCGGCCTGGCCCGGGTCTACGAGAACAGTCACGGCATTTACCTGCGGGATGATG CGGTGGTCGCGGCGGCGCAATTGTCGGCCCGCTACCTGGCTGGTCGTCAGTTGCCAGACAAGGCTGTGGATGTGTTGGAC ACTGCCTGCGCCCGCGTGCGCATCAGCCTGGCCGCTGCGCCGCATAGCCTGGAGCGATTGCGCGGCGAGTTGGCTGAAGG CGAGCGCCAGCGCCAGGCGCTACGTCGTGATGCGCAGGCCGGCCTATCAATTGATCTTCAGGCGCTGGAAGCGCTGGAGG TACGCCTGGAGGCCATCGAAGACGAGCGCCGAACGCTGGAGATCCACTGGACCGAGCAACGCATTCTTGCGGAGCGCCTG TTGGCGCTTCGCCAGCAATTGGCCAAGGTACGGGACGGTGCGGTGGATCAACCCCTCAGCGTCGAAGCCTTGGAAGCGGC GTTGCATGAAACACACGGCACGTTGGTGGCTGCGCAAGTCCAAGAGCGCCTGGTCAGCTTCGAAGTTTGCCCGCGACTGG TAGCCGAAGTCATCAGTGCCTGGACCGGTGTGCCGCTGGCACAACTGGCGCGGGAGCACAGTTTGAAAGTCGCCAGTTTC GCGACGGACCTGCGTGCTCGTATTCGTGGTCAGGAGCCGGCTGTGCGGGCGCTTGATCGCGCGATGCGTGCCGCCGCCGC AGGCCTGAACAAACCCGACGCTCCGGTGGGCGTGTTTCTGTTGGTAGGGCCCAGTGGCGTCGGCAAGACCGAGACGGCGC ATGCCCTGGCCGACCTGCTCTACGGCGGTGATCGTTTTATCACCACGCTCAACATGGCCGAATTCCAGGAGAAACATACG GTTTCCCGGCTGATTGGCGCGCCGCCGGGCTACGTCGGTTTTGGCGAAGGCGGCATGCTCACCGAAGCCGTGCGGCAAAA GCCCTATTCAGTGGTGCTGCTCGATGAGGTCGAAAAAACCGACCCGGATGTGTTGAATCTGTTCTACCAGATCTTCGACA AGGGCTTGGCCAACGACGGAGAAGGGCGGGAGATTGATTTTCGCAACACCCTGATCCTGATGACGTCGAACCTGGGCAGC GAACGCATCAACGAGTTGTGCGAAAACGGTACAAAACCAAGTGCCGAATGCCTTGAAGAGTCCATTCGCCCAATACTCAG TCAACATTTCAAACCCGCGCTGTTGGCGCGCATGTGCGTGGTGCCGTACTACCCGCTCAACGGGCCGGTGTTACGTGAAC TGGTGGAAGTCAAACTCGACCACCTGGGCGAGCGGCTGCACCGTCGTCAATTGGGTTTCAGTTATTGCGGGCACCTTGTG AACCACCTGGTCGAGCGTTGCAGTCGTAATGATCGTGGCGCACGACTGATTGACCAACTGCTTGACCTGCACCTGATGCC GCTGGTTGCCGACCGGTTGCTCGCCGCCATGGCCGGTGGCGAACAGCTACGGCACGTACACGCCGTGCTCAACGGCGACG CCAGTCTCGCGTGTGAGTTCTCCTGA Protein sequence : MINVDLQQLIQALDAETRSDLSRSAEQCVARGADKVLVEDLMLGLLERPQGLLARALQDAQVSAGELSAALQPRMGHSAS RNPVFAPELVQWLQDALLVANLELGCSQVGQAALILALLRNPLRYAGSAYQALLTRLNVDRLKDFALSQQTHPVADHSAK PDDSLLARFTHDLTRQAREGQLDPVLCRDGEVRQMIDILVRRRKNNPIVVGEAGVGKTAIVEGLALRIAAAEVPSVLEGV ELLSLDMGLLQAGASIKGEFERRLKGVIDEVKASPKSIILFIDEAHTLIGAGGNAGGADAANLLKPALARGELRTIAATT WAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLARVYENSHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLD TACARVRISLAAAPHSLERLRGELAEGERQRQALRRDAQAGLSIDLQALEALEVRLEAIEDERRTLEIHWTEQRILAERL LALRQQLAKVRDGAVDQPLSVEALEAALHETHGTLVAAQVQERLVSFEVCPRLVAEVISAWTGVPLAQLAREHSLKVASF ATDLRARIRGQEPAVRALDRAMRAAAAGLNKPDAPVGVFLLVGPSGVGKTETAHALADLLYGGDRFITTLNMAEFQEKHT VSRLIGAPPGYVGFGEGGMLTEAVRQKPYSVVLLDEVEKTDPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS ERINELCENGTKPSAECLEESIRPILSQHFKPALLARMCVVPYYPLNGPVLRELVEVKLDHLGERLHRRQLGFSYCGHLV NHLVERCSRNDRGARLIDQLLDLHLMPLVADRLLAAMAGGEQLRHVHAVLNGDASLACEFS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-123 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB4 | YP_005211192.1 | chaperone ClpB | VFG2084 | Protein | 2e-155 | 47 |
