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Name : clpB3 (PSF113_5806) Accession : YP_005211175.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : chaperone ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 6689223 - 6691913 bp Length : 2691 bp Strand : + Note : Type VI secretion system ClpB protein DNA sequence : ATGGGTGAAATCAGTCGCGCCGCGTTGTTCGGCAAACTCAACAGCGTGGCCTACAAAGCCATTGAAGCCGCCACCGTGTT CTGCAAATTGCGCGGTAACCCTTATGTGGAACTGGCCCACTGGTTTCACCAGTTGCTGCAACTGCAGGACTCGGACCTGC ACCGCATCATTCGCCAGTTCAACATCGAGCCGGCGCGCCTGGCCCGCGACCTGACCGAAGCCCTGGACCGCCTGCCACGG GGTTCGACGTCGATCACCGACCTGTCGTCCCACGTGGAAGAAGCCGTGGAACGCGGCTGGGTCTACGGCAGCCTGATGTT CGGCGAAAGCCAGGTGCGCACCGGTTACCTGGTGCTGGGCATTCTCAAGACCCCGAGCCTGCGCCACGCGCTGCTGGGCC TGTCGTCGGAGTTCGACAAGGTCAAGGTCGAAGCCCTGAGCGAACGGTTTGACGAATACGTCGGCGACTCGCCGGAAAAC GCCCTGACTGCCAGCGACGGCTTCAATGCCGGTGCCGTGCCGGGCGAAGCCAGCGGCGCCATGGCCCCTAGCGCCATGGG CAAACAGGAAGCCCTCAAGCGCTTTACCGTCGACCTTACCGAGCAGGCCCGCAGCGGCAAGCTCGACCCAATCGTCGGCC GTGACGAAGAGATCCGCCAACTGGTGGACATCCTCATGCGCCGCCGGCAGAACAACCCGATCCTTACCGGTGAAGCCGGC GTGGGCAAGACCGCCGTGGTCGAAGGCTTCGCCCTGCGCATCGTCGCCGGCGACGTACCACCGGCCCTCAAGGACGTGGA ACTGCGCAGCCTCGACGTTGGCCTGTTGCAGGCCGGCGCGAGCATGAAAGGCGAGTTCGAACAGCGCCTGCGCCAGGTCA TCGAAGACGTCCAGGCCTCGCCCAAGCCGATCATCCTGTTCATCGACGAAGCCCACACCCTGGTGGGTGCCGGCGGCGCC GCCGGCACGGGCGACGCGGCCAACCTGCTCAAGCCGGCGTTGGCCCGCGGCACCTTGCGCACCGTGGCCGCCACGACCTG GGCCGAGTACAAGAAGCACATCGAAAAAGACCCGGCCCTGACCCGCCGTTTCCAAGTGGTGCAAGTGGCCGAGCCGTCGG AAGACAAGGCCCTGCTGATGATGCGCGGCGTGGCCTCGACCATGGAAAAACACCACCAGGTGCAGATCCTCGACGAAGCC CTGGAAGCCTCGGTCAAGCTGTCCCACCGCTACATTCCCGCGCGCCAGCTGCCGGACAAATCCGTGAGCCTGCTGGACAC CGCTTGCGCCCGCGTCGCCATCAGCCTGCACGCCGTACCGGCCGAAGTGGACGACAGCCGTCGGCGCATCGAAGCGCTGG AAACCGAGCTGCAAATCATCGCCCGTGAACACGCGATTGGCGTGGTCATCGGCAGCCGCCAGACCCAGAGCGAAACCCTG CTGAGCGCCGAGCGCGAACGCCTGGCCGAGCTGGAAGGCCGCTGGGCCGAAGAGAAAACCCTGGTGGACGAACTGCTCGC CACCCGCGCCACCCTGCGCGAGCGCGTTGGCGTGGTGGACAGCGAGGACAACAGCGAAGCTTCTGACAACGAAAGCCACC AACTGCGTGAGAAACTGGTGGACCTGCAACAGCGCCTGACGGCCCTGCAAGGCGAAACTCCGCTGATCCTGCCGACCGTG GATTACCAGGCCGTGGCCTCGGTGGTCGCCGACTGGACCGGTATCCCGGTGGGCCGCATGGCCCGCAACGAACTGGAAAC CGTGCTCAACCTCGACCAGCACCTGAAGAAACGCATCATCGGCCAGGACCATGCCTTGCAGATGATCGCCAAGCGCATCC AGACCTCCCGCGCCGGCCTCGACAACCCGAGCAAGCCGATTGGTGTGTTCATGCTTGCCGGCACTTCCGGCGTGGGCAAG ACCGAAACCGCCCTGGCCCTGGCCGAAGCCATGTACGGCGGCGAGCAGAACGTTATCACCATCAACATGAGCGAGTTCCA GGAAGCCCACACCGTGTCGACCCTCAAGGGCGCGCCACCGGGCTACATCGGCTATGGCGAAGGCGGCGTGCTGACCGAGG CCGTGCGGCGCAAACCGTACAGCGTGGTGTTGCTGGACGAGGTGGAAAAGGCCCACCCGGACGTGCATGAGATCTTCTTC CAGGTGTTCGACAAAGGCGTGATGGAGGACGGCGAAGGCCGGGTGATCGACTTCAAGAACACCTTGATCCTGCTGACCAC CAACGCCGGCACCGAGTTGATCGCCCAGGTCTGCAAAGACCCGCAGAACGTGCCCGAGCCGGAAGAAATCGCCAAGGCCC TGCGCCAACCGCTGCTGGAGATTTTCCCGCCGGCCTTGCTGGGCCGCCTGGTGACGATCCCGTACTACCCGCTCAGCGAC GAGATGCTCAAGGCCATCACCCGCCTGCAACTCAACCGCATCAAGAAGCGCGTGGAAAGCACCCACAAAGTCGCCTTCGA CTACGACGACGCGGTGATCGATTTGATCGTCTCGCGTTGCACCGAAACCGAAAGCGGCGGGCGCATGATCGACACCATCC TGACCAACAGCCTGCTGCCGGACATGAGCCGCGAGTTCCTGACCCGCATGCTCGAAGGCAAGGCTTTGGCCGGGGTGCGG ATCAGCGCCGTGGATAACGAATTGCAGTACGATTTCAGCGACGCGGCCTGA Protein sequence : MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQFNIEPARLARDLTEALDRLPR GSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLGILKTPSLRHALLGLSSEFDKVKVEALSERFDEYVGDSPEN ALTASDGFNAGAVPGEASGAMAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASPKPIILFIDEAHTLVGAGGA AGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEA LEASVKLSHRYIPARQLPDKSVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGVVIGSRQTQSETL LSAERERLAELEGRWAEEKTLVDELLATRATLRERVGVVDSEDNSEASDNESHQLREKLVDLQQRLTALQGETPLILPTV DYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGK TETALALAEAMYGGEQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFF QVFDKGVMEDGEGRVIDFKNTLILLTTNAGTELIAQVCKDPQNVPEPEEIAKALRQPLLEIFPPALLGRLVTIPYYPLSD EMLKAITRLQLNRIKKRVESTHKVAFDYDDAVIDLIVSRCTETESGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVR ISAVDNELQYDFSDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB3 | YP_005211175.1 | chaperone ClpB | VFG2076 | Protein | 0.0 | 88 |
| clpB3 | YP_005211175.1 | chaperone ClpB | VFG2084 | Protein | 9e-145 | 43 |
