Gene Information

Name : impG2 (PSF113_5804)
Accession : YP_005211173.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein ImpG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6686358 - 6688217 bp
Length : 1860 bp
Strand : +
Note : Type VI secretion system ImpG/VasA

DNA sequence :
ATGAACCCACGCCTGCTGGAGCTGTACAACCAGGAACTGCACCACGTGCGCGAAAGCGCGGCGGAGTTCGCCAAGGAATA
CCCGAAGATCGCCAGTCGGCTGACGTTGTCCGGCATGGACTGCGCCGACCCGTATGTCGAGCGCCTGCTGGAAGGCTTCG
CCTACCTGACGGCGCGGGTGCAGCTCAAGCTCGACGCCGAGTACCCGACCTTCACCCACAACCTGCTGGAAATCGCCTAC
CCGCATTACCTGGCGCCGACGCCGTCGATGACCGTGGTGCAATTGCAGGCCGACCCGGACGAAGGCTCGCTGAGCAGTGG
TTTCCCGCTGCCGCGCGATACGGTCCTGCGTGCCGCCCTGGGGCGTGAAACCCAGACCTGCTGCGAGTACCGCACCGCCC
ACGCGGTGACGTTGTGGCCGTTGCAGGTCAGCCAGGCCGAATACTTCGGCAACCCGTCCGCCGTGCTCGGGCGCCTGGCC
GCCAGCGAACCGAAAGCCAAGGCCGGCCTGCGCATCACACTGCGCACCGGCGCCGAGCTGCCGTTCAACAGCCTGGCCCT
GGACAACCTGCCGCTGTACTTGAGCGGTGCCGACGAACAGCCTTTCCGCCTCTACGAACAACTGCTGGGCAATACCTGCG
CAGTGTTCGCCCGCAAGCCCGGCGGCGACTGGGTGGAGCGGCTGCCCCAGGATGCGTTGCGCTCGCGCGGCTTCGACGAT
GCCGACGCCGCGCTGCCGGTGGTGCCGCGGGCCTTCCAGGGCTATCGCCTGTTGCAGGAATACTTCGCCCTGCCCCACCG
TTTCCTGTTTGTCGACTTCACCCAGTTGAGCCGCGCGGTCAAGCGTTGCGACGGCCAGGAGCTGGAGCTGATCGTGCTGT
TCGACCGTCACGACCCAAGCCTGGAAGGCAGCGTCGGCGCTTCGCAGTTCCTGCCGTTCTGCACCCCGGCCATCAACCTG
TTTCCCAAGCGCCTGGACCGCATTCACTTGTCGGATCGGGTCAACGAACACCACGTGATCGCCGACCGTACCCGGCCGAT
GGATTTCGAAGTGCATTCGCTGAACGGCCTCACCGGCCACGGCACCGGGCCGGAGCAGCCGTTCCTGCCGTTCTACGCCG
TGCGCGATCCGTCCCGTTACGGCCGCGACCAGGCCTATTACACCGTGCGCCGCGAACCGCGCGTGCTGTCCAGCGATCAA
CGACGCAACGGCCCGCGCTCGACCTACATCGGCAGCGAAACCTTCGTCAGCCTGGTGGACAGCCAGCAAGCGCCCTATCG
CCACGACCTGCGCCAACTGGGCGTGACCGCGTTGTGCACCAACCGCGACCTGCCGCTGTTCATGAGCGTGGGCAACGGCA
AGACCGACTTCACCCTCGCCGACAGTGCTCCGGTGGGCGCCGTGCGCTGCGTGGCAGGTCCGAGTCGCCCACGGGCCAGC
CACGCCCACGACGCCAAGGCCTGGCGGCTGATCAGCCAGTTGTCACTGAACTACTTGTCGTTGAGCGAACAAGGCCAAGG
CGCGGCCGCCCTGCGTGAACTGCTGCGCCTGTACGGCGACAGCAACGACGCGGCGCTGCAATTGCAGATCGAAGGCCTGC
GCGAAGTCAGCAGCAAGGCCTGCACCCGGCGCCTGCCGATGCCCGGCCCGATCGTGTTTGGTCGAGGCCTGGAAATCACC
CTGGAATTCGATGAAAACGCGTTTCGCGGCACCGGGGTGTTCCTGCTCGGCGCGGTGTTCGAGCGCTTCCTGGCACGCTA
TGTGTCGATCAACAGTTTTACCGAGACGGTGATCCGTACCACCGAACGCGGCGAGATCATGCGATGGAAAGCCAAGCCCG
GACGTCGTCCGACCCTGTGA

Protein sequence :
MNPRLLELYNQELHHVRESAAEFAKEYPKIASRLTLSGMDCADPYVERLLEGFAYLTARVQLKLDAEYPTFTHNLLEIAY
PHYLAPTPSMTVVQLQADPDEGSLSSGFPLPRDTVLRAALGRETQTCCEYRTAHAVTLWPLQVSQAEYFGNPSAVLGRLA
ASEPKAKAGLRITLRTGAELPFNSLALDNLPLYLSGADEQPFRLYEQLLGNTCAVFARKPGGDWVERLPQDALRSRGFDD
ADAALPVVPRAFQGYRLLQEYFALPHRFLFVDFTQLSRAVKRCDGQELELIVLFDRHDPSLEGSVGASQFLPFCTPAINL
FPKRLDRIHLSDRVNEHHVIADRTRPMDFEVHSLNGLTGHGTGPEQPFLPFYAVRDPSRYGRDQAYYTVRREPRVLSSDQ
RRNGPRSTYIGSETFVSLVDSQQAPYRHDLRQLGVTALCTNRDLPLFMSVGNGKTDFTLADSAPVGAVRCVAGPSRPRAS
HAHDAKAWRLISQLSLNYLSLSEQGQGAAALRELLRLYGDSNDAALQLQIEGLREVSSKACTRRLPMPGPIVFGRGLEIT
LEFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVIRTTERGEIMRWKAKPGRRPTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0289 NP_454871.1 hypothetical protein Not tested SPI-6 Protein 4e-118 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
impG2 YP_005211173.1 protein ImpG VFG2074 Protein 0.0 82