Gene Information

Name : algR (PSF113_5707)
Accession : YP_005211074.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : protein AlgR
Function : -
COG functional category : -
COG ID : -
EC number : 4.2.1.75
Position : 6580625 - 6581371 bp
Length : 747 bp
Strand : -
Note : alginate biosynthesis regulatory protein

DNA sequence : 
ATGAATGTCCTGATCGTTGATGACGAACCACTGGCCCGCGAGCGCCTGAGCCGAATGGTTGGCGAGCTCGAGGGTTACAG
TGTCCTGGAGCCGAGCGCCACCAATGGCGAAGAGGCATTGGCCCTTATTGACAGCCACAAGCCGGATATCGTGCTGCTCG
ACATTCGCATGCCAGGGCTGGACGGCCTGCAAGTGGCGGCGAAGTTGTGCGAACGAGAGTCGCCACCCGCCGTGGTGTTC
TGTACCACCCGGGACGACTTCCCACCCGAGGTGTTGCAGGCCGGTGACGTGGGCTACCTGGTCAAGCCAGTGGCCGCCGA
AGCGTTGCTCGAAGCCTTGCGCAAGGCTGAGCGACCCAACCGTGTGCAACTGGCGGCGTTGACCCGTCCGGCCGCCGAAA
GCGGTAGCGGTCCGCGCAGCCATATCAGTGCGCGTACCCGCAAAGGCATCGAGCTGATCCCGTTGAACCAGGTGGTCTAC
TTTATAGCCGACCATAAATACGTGACCCTGCGCCATGAGAGTGGCGAGGTGTTGCTGGACGAGCCACTCAAGGCCCTCGA
AGACGAGTTCGGCGAGCGTTTCGTACGCATCCACCGCAACGCCCTCGTGGCCCGCGAGCGCATCGAGCGTTTGCAGCGCA
CCCCCCTTGGGCATTTCCAACTGTTCCTCAAGGGCCTCAATGGCGATGCGCTGATTGTCAGCCGGCGGCACGTGGCCGGC
GTGCGCAAGATGATGCAGCAGCTTTAG

Protein sequence : 
MNVLIVDDEPLARERLSRMVGELEGYSVLEPSATNGEEALALIDSHKPDIVLLDIRMPGLDGLQVAAKLCERESPPAVVF
CTTRDDFPPEVLQAGDVGYLVKPVAAEALLEALRKAERPNRVQLAALTRPAAESGSGPRSHISARTRKGIELIPLNQVVY
FIADHKYVTLRHESGEVLLDEPLKALEDEFGERFVRIHRNALVARERIERLQRTPLGHFQLFLKGLNGDALIVSRRHVAG
VRKMMQQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 1e-43 44
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 1e-43 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_005211074.1 protein AlgR VFG0119 Protein 8e-93 83