Gene Information

Name : hemC (PSF113_5706)
Accession : YP_005211073.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : HemC protein
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.61
Position : 6579545 - 6580486 bp
Length : 942 bp
Strand : -
Note : Porphobilinogen deaminase

DNA sequence :
ATGTCCCCTCGCGAGATCCGCATCGCCACCCGTAAAAGTGCCCTGGCCCTCTGGCAGGCCGAATACGTCAAAGCCCGCCT
GGAAGCGGCCCATCCCGGCCTGATCGTGACCCTGGTGCCCATGGTCAGTCGTGGGGACAAGCTGCTGGACTCGCCGCTGT
CGAAGATCGGCGGCAAGGGCCTGTTCGTCAAAGAGCTGGAAACCGCGTTGCTGGACAACGAAGCCGACATCGCCGTGCAT
TCGATGAAAGACGTGCCCATGGACTTCCCCGAAGGCCTGGGCCTGTTTTGCATCTGCGAGCGGGAAGACCCACGCGATGC
GTTCGTCTCCAACACGTTTTCCAGTCTTGAAGCACTGCCTGCCGGGAGCGTGGTCGGCACTTCCAGCCTGCGTCGCCAGG
CACAGTTGCTGACTCGCCGCCCGGACCTGCAAATCCGTTTCCTGCGCGGTAACGTCAATACGCGCCTGGCCAAGCTCGAT
GCCGGTGAGTACGACGCGATCATCCTCGCCGCCGCCGGCCTGATCCGCCTGGGCTTCGAGGAACGCATCACCTCGGCCAT
CAGCGTCGACGACAGCCTGCCGGCCGGGGGGCAAGGTGCGGTGGGCATCGAGTGCCGCAGCGCCGACAGCGACATCCACG
CCCTGCTGGCGCCGCTGCATCATGAAGACACCGCCACGCGGGTGTTCGCCGAACGTGCCCTCAACAAACATCTCAATGGC
GGTTGCCAAGTGCCGATCGCCTGTTACGCCGTGCTGGAAGGCGAGCAGGTCTGGTTGCGCGGTCTGGTGGGGGATCCCAA
CGGTGGCCGGCTGCTCAGCGCCGAAGCCCGGGCACCGCGCCACGATGCCGAGGCATTGGGCGTGCGGGTGGCCGAGGACC
TGCTGAGCCAGGGCGCTGCCGACATCCTCAAGGCCGTCTACGGCGAGGCCGGCCACACGTGA

Protein sequence :
MSPREIRIATRKSALALWQAEYVKARLEAAHPGLIVTLVPMVSRGDKLLDSPLSKIGGKGLFVKELETALLDNEADIAVH
SMKDVPMDFPEGLGLFCICEREDPRDAFVSNTFSSLEALPAGSVVGTSSLRRQAQLLTRRPDLQIRFLRGNVNTRLAKLD
AGEYDAIILAAAGLIRLGFEERITSAISVDDSLPAGGQGAVGIECRSADSDIHALLAPLHHEDTATRVFAERALNKHLNG
GCQVPIACYAVLEGEQVWLRGLVGDPNGGRLLSAEARAPRHDAEALGVRVAEDLLSQGAADILKAVYGEAGHT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-76 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-76 61