Gene Information

Name : ssuB (PSF113_5630)
Accession : YP_005210997.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Resistance
Product : protein SsuB
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.3
Position : 6498431 - 6499237 bp
Length : 807 bp
Strand : -
Note : Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB

DNA sequence :
ATGACCGCCCAACAACCTCCGCGTCTGCTGCGGGGCATACCGCTGGCGGTGCGCCAACTGCAAAAAACCTTCGGCACGCG
CCAGGTATTGCGCGACATCGACCTGCATATCCCGGCGGGGCAGTTCGTGGCCGTGGTCGGTCGCAGCGGCTGTGGCAAAA
GTACCTTGCTGCGGTTGCTGGCCGGCCTCGATCAACCCACCGATGGCCAACTGTTGGCGGGCTCGGCGCCGCTGAGTGCC
GCGCAACAGGACACGCGGTTGATGTTCCAGGAAGCGCGTTTGCTGCCCTGGAAAAAAGTCATCGACAACGTCGGCCTCGG
GCTCAAGGGCAACTGGCGCCCGCAGGCATTGCAAGCACTGGAAGCTGTCGGCCTGCCCGACCGCGCCCATGAGTGGCCGG
CGGCGCTGTCCGGCGGGCAGAAACAACGAGTGGCCCTGGCCCGCGCGCTGATTCATCAGCCACGCCTGTTGCTGCTCGAC
GAACCCTTGGGCGCGCTGGATGCCCTGACCCGCATCGAGATGCAGCAACTGATCGAAAACCTCTGGCAGCAGCACGGCTT
CACGGTGTTGCTGGTGACCCACGACGTCAGCGAGGCGGTAGCGATTGCCGATCGGGTGATCCTGATCGAGGACGGCCAGA
TCGGCCTGGACCTGCCCATCGACCTGCCACGCCCACGGGTTCGCGGCTCTCATCGCTTGGCGAGCCTGGAAACCGAAGTC
CTCAACCGTGTGCTGTCCTTGCCCGGCCAACCGCCGGAACCCGAGCCCGTTTCACCCTTGCCCACGCAACTGCGTTGGGC
GCAATAA

Protein sequence :
MTAQQPPRLLRGIPLAVRQLQKTFGTRQVLRDIDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLDQPTDGQLLAGSAPLSA
AQQDTRLMFQEARLLPWKKVIDNVGLGLKGNWRPQALQALEAVGLPDRAHEWPAALSGGQKQRVALARALIHQPRLLLLD
EPLGALDALTRIEMQQLIENLWQQHGFTVLLVTHDVSEAVAIADRVILIEDGQIGLDLPIDLPRPRVRGSHRLASLETEV
LNRVLSLPGQPPEPEPVSPLPTQLRWAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-39 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssuB YP_005210997.1 protein SsuB NC_008702.1.4606598. Protein 3e-16 42
ssuB YP_005210997.1 protein SsuB NC_012469.1.7686878. Protein 4e-22 42