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Name : rspB (PSF113_5588) Accession : YP_005210955.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein RspB Function : - COG functional category : - COG ID : - EC number : - Position : 6456198 - 6456572 bp Length : 375 bp Strand : + Note : HrpB type III secretion apparatus family DNA sequence : GTGGACATACACGCCATCGACCCCAGCAACCTTGCCTCCACGTCCGCCAAAACGAACGCCAGGCCACAAGCAAGCGCCGA GACCAGCGATGTCAGTTGGTTCAACGCACAAATGCGCGAAAAAGCCCCCGCCCCGAACAGCGAAAACAACGTCGCGGCAC GCATCATTGACTCGCTGTCGAGCCGCTCCGGTGAACTGCAGCGCCTGGATGATCGCGCCAACCGAGACATGCTCAAGGCC ATCCGCACCGCCGACCCACAGGACATGTTGCAGTCGAACCGCTCGTTGTCGTCCTTCCACCTGGAAAGCCTGATGACCGC GAAAGTGGTCAGCAAAGGCTCCCAGGCCATCGAGAAGCTCACCAATCTTCAGTAA Protein sequence : MDIHAIDPSNLASTSAKTNARPQASAETSDVSWFNAQMREKAPAPNSENNVAARIIDSLSSRSGELQRLDDRANRDMLKA IRTADPQDMLQSNRSLSSFHLESLMTAKVVSKGSQAIEKLTNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB | AAT96321.1 | HrpB | Virulence | S-PAI | Protein | 2e-17 | 46 |
| hrpB | AAT96360.1 | HrpB | Virulence | S-PAI | Protein | 1e-17 | 46 |
| hrpB | NP_791210.1 | type III secretion protein HrpB | Virulence | Hrp PAI | Protein | 5e-13 | 45 |
| hrpB | AAB00128.1 | HrpB | Virulence | Hrp PAI | Protein | 3e-13 | 45 |
| hrpB | AAT96280.1 | HrpB | Virulence | S-PAI | Protein | 2e-17 | 44 |
| hrpB | ABA47315.1 | HrpB | Virulence | S-PAI | Protein | 3e-18 | 41 |
