Gene Information

Name : rdgB (PSF113_5547)
Accession : YP_005210914.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : protein RdgB
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.1.15
Position : 6416303 - 6416899 bp
Length : 597 bp
Strand : +
Note : Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific)

DNA sequence :
ATGATCAATTTCACCCAACTCGTACTGGCCAGCCACAACGCCGGCAAACTCAAGGAACTGCAAGCCATGCTCGGCGGGTC
GGTGCAGTTGCGCTCGATTGGCGAGTTCAGCCAGGTGGAACCGGAAGAGACCGGCCTGTCGTTCGTCGAGAACGCCATCC
TCAAGGCCCGCAATGCCGCACGCATCTCGGGCCTGCCGGCACTGGCCGACGATTCCGGGCTGGCCGTGGACTTCCTGGGC
GGCGCGCCGGGCATTTACTCGGCCCGCTACGCTGATGGCAAAGGTGACGCGGCGAACAACACCAAGCTGCTCGACGCACT
CAAGGACGTGCCCGAAGCCGAGCGCGGCGCGCAGTTCGTGTGTGTGCTGGCCCTGGTCCGCCATGCCGATGACCCATTGC
CGATCCTCTGCGAAGGCCTGTGGCACGGGCGCATTCTCACCGAAGCCAGCGGCGAGCACGGTTTCGGCTATGACCCGTTG
TTCTGGGTGCCGGAGCGCAATTGCTCCAGCGCCGAGCTGGGACCGGTGGAAAAGAATCAACTGAGCCACCGCGCCCGCGC
CATGGCCCTGCTGCGTCAACGCCTGGGCCTGCAATGA

Protein sequence :
MINFTQLVLASHNAGKLKELQAMLGGSVQLRSIGEFSQVEPEETGLSFVENAILKARNAARISGLPALADDSGLAVDFLG
GAPGIYSARYADGKGDAANNTKLLDALKDVPEAERGAQFVCVLALVRHADDPLPILCEGLWHGRILTEASGEHGFGYDPL
FWVPERNCSSAELGPVEKNQLSHRARAMALLRQRLGLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 3e-25 46