Gene Information

Name : ribC (PSF113_5239)
Accession : YP_005210614.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Unknown
Product : protein RibC
Function : -
COG functional category : -
COG ID : -
EC number : 2.5.1.9
Position : 6077310 - 6077987 bp
Length : 678 bp
Strand : -
Note : Riboflavin synthase alpha chain

DNA sequence :
ATGTTTACCGGCATCATCGAATCCATCGGCAGCATCCGTGCACTCACCCCCAAGGGCGGCGATGTGCGGGTCTACGTCGA
AACCGGCAAGCTCGACCTGAGCGACGTCAAGTTGGGCGACAGCATTGCGGTCAACGGCGTGTGCCTGACGGCCGTCGAAT
TGCCAGGCAACGGTTTCCTGGCGGACGTCAGCCGCGAAACCCTCGACTGCACGGCCATGAACGACCTCAAGAGCGGCAGC
CCGGTCAACCTGGAAAAAGCCCTGACCCCCACCACTCGCCTGGGCGGGCACCTGGTCAGCGGCCACGTGGACGGCGTCGG
TGAAGTGGTTTCGCGCACGGATAACGCCCGGGCCGTGGAGTTTCGCATCCGCGCGCCGAAGGAATTGGCCAAGTACATCG
CCCACAAAGGCTCGATCACCGTCGACGGCACCAGCCTGACAGTCAACGCGGTGGATGGCGCCGAATTCCTGCTGACAATC
ATTCCCCACACCCTGAGCGAAACCATCATGGCCTCGTACCGGCCAGGTCGCCGGGTCAACCTGGAAGTCGACTTGCTGGC
CCGTTACCTGGAGCGCCTGCTTATGGGAGACAAGGCCGCAGAGTCTGACTCTTCACAACGGCGGGCGGGTAACATCACTG
AAAGTTTTCTGGCCGCCAACGGCTACCTCAAATCCTGA

Protein sequence :
MFTGIIESIGSIRALTPKGGDVRVYVETGKLDLSDVKLGDSIAVNGVCLTAVELPGNGFLADVSRETLDCTAMNDLKSGS
PVNLEKALTPTTRLGGHLVSGHVDGVGEVVSRTDNARAVEFRIRAPKELAKYIAHKGSITVDGTSLTVNAVDGAEFLLTI
IPHTLSETIMASYRPGRRVNLEVDLLARYLERLLMGDKAAESDSSQRRAGNITESFLAANGYLKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00295 YP_008211621.1 Riboflavin synthase alpha chain Not tested AbaR26 Protein 8e-54 57
BJAB07104_00291 YP_008207756.1 Riboflavin synthase alpha chain Not tested AbaR25 Protein 8e-54 57