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Name : ybgA (PSF113_4917) Accession : YP_005210301.1 Strain : Pseudomonas fluorescens F113 Genome accession: NC_016830 Putative virulence/resistance : Virulence Product : protein YbgA Function : - COG functional category : - COG ID : - EC number : - Position : 5708887 - 5709849 bp Length : 963 bp Strand : + Note : COG1683: Uncharacterized conserved protein / FIG143828: Hypothetical protein YbgA DNA sequence : ATGCCCAGCACAGCCATCGCCAAACCCAGAATCGCCATCAGCGCCTGTCTGATGGGTGCTGAAGTTCGCTTTAACGGCGG GCACAAGCAATCGCAGTTGTGCAGCCGCACCCTCGTCGATTATTTCGATTTCGTGCCGGTGTGCCCCGAAGTCGCCATCG GCCTGGGTATCCCCCGGGAGCCGATTCGCCTGGTGGGCAACCCCGAACACCCCGAGGCGCTCGGCACGGTGAATCGCGAC CTCAACGTGACCCGGGCATTGGCCGACTACGGGCAGCAGATGGCTGGGGAGCTGGATGACATCTGCGGCTACATCTTCAT GCAGAAATCGCCGTCCTGCGGACTGGAACGGGTCAAGGTCTACGACCATAACGGTGTGACCCAGGACAGCGGCGGCCGCG GCATCTATGCCCAGGCCTTTTGCGAACGCCACCCCGACCTGCCGGTGGAGGAGGACGGGCGTCTCAACGACCCGGTGCTG CGCGAGAACTTCCTGACCCGGGTATTTGCCTATGCCGCCTGGCAATCCTTGCGTCGCCAAGGCTTGACCCGTCGCGACCT GATCGAATTCCACGCGCGCTACAAATACCTGCTGATGGCGCACAACCCAGTGCAGTACAAGGCCCTGGGCAACTTGCTGG GCAAGATGGGCAAGGCCGACCCCAATGAGCTGGGCCCACGTTATTTCAGCGCATTGATGGCGGCCTTGAAGAAATGCGCC ACCCGCCGCACCCACACCAATGTGCTGCAACACCTGAGCGGTTACCTCAAGCGCGCCATCGACGCCGAGGACAAACAGGA AGTGCAGCATCTGATCGGGCAATATCGCCTCGGCATCGTGCCCTTGGTGGTGCCACTGACGTTGCTCAAGCATCACTTGC GCCAGCACCCCGATCCTTACCTGGCGCAGCAGGTCTACCTGCAACCGCACCCGGAAAACCTCAGTTTGCGAAACGCTATT TGA Protein sequence : MPSTAIAKPRIAISACLMGAEVRFNGGHKQSQLCSRTLVDYFDFVPVCPEVAIGLGIPREPIRLVGNPEHPEALGTVNRD LNVTRALADYGQQMAGELDDICGYIFMQKSPSCGLERVKVYDHNGVTQDSGGRGIYAQAFCERHPDLPVEEDGRLNDPVL RENFLTRVFAYAAWQSLRRQGLTRRDLIEFHARYKYLLMAHNPVQYKALGNLLGKMGKADPNELGPRYFSALMAALKKCA TRRTHTNVLQHLSGYLKRAIDAEDKQEVQHLIGQYRLGIVPLVVPLTLLKHHLRQHPDPYLAQQVYLQPHPENLSLRNAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf319 | NP_460354.1 | inner membrane protein | Not tested | SPI-2 | Protein | 5e-64 | 42 |
| STY1731 | NP_456139.1 | putative pathogenicity island protein | Not tested | SPI-2 | Protein | 5e-64 | 42 |
| t1257 | NP_805060.1 | pathogenicity island protein | Not tested | SPI-2 | Protein | 5e-64 | 42 |
| SC1410 | YP_216397.1 | inner membrane protein | Not tested | SPI-2 | Protein | 3e-64 | 42 |
| ORF 319 | CAB37410.1 | - | Not tested | SPI-2 | Protein | 4e-64 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ybgA | YP_005210301.1 | protein YbgA | VFG0490 | Protein | 2e-64 | 42 |
