Gene Information

Name : PSF113_4655 (PSF113_4655)
Accession : YP_005210039.1
Strain : Pseudomonas fluorescens F113
Genome accession: NC_016830
Putative virulence/resistance : Virulence
Product : Pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 5411499 - 5412950 bp
Length : 1452 bp
Strand : +
Note : -

DNA sequence :
ATGTCCGTCCGTCGCACCAAAATCGTCGCTACCCTTGGCCCGGCCAGTAATTCGCCGGAAGTTCTCGAACAGCTGATTCT
GGCTGGCCTGGACGTTGCCCGCCTGAATTTCTCCCACGGCACCCCCGACGAGCACAAGGCTCGTGCCAAGCTGGTGCGCG
ACCTCGCCGCCAAGCACGGCCGCTTCGTTGCCCTGCTGGGTGACCTGCAAGGCCCGAAGATCCGTATCGCCAAATTCGCC
AACAAGCGCATCGAGCTGAAGATCGGTGACACCTTCACCTTCTCCACCAGCCACCCGCTGACCGAAGGCAACCAGCAAGT
GGTCGGCATCGACTACCCGGACCTGGTCAAGGACTGCGGCGTGGGCGACGAGCTGCTGCTCGACGACGGTCGCGTGGTGA
TGCGCGTCGAAACTGCCACCGCCACTGAACTGCACTGCGTCGTGACCATCGGCGGCCCGCTGTCGGACCACAAAGGCATC
AACCGTCGCGGCGGTGGCCTGACCGCTCCGGCCCTGACCGAAAAAGACAAGGCCGACATCAAGCTCGCTGCGGAAATGGA
AGTCGACTACCTGGCCGTGTCCTTCCCGCGTGACGCCGCCGACATGGAATACGCCCGTCAACTGCGCGACGAAGCCGGCG
GTACTGCCTGGCTGGTGGCCAAGATCGAACGCGCCGAAGCCGTGGCCGACGACGAAACCCTCGATGGCCTGATCAAGGCG
TCCGACGCCGTGATGGTGGCCCGTGGCGACCTCGGCGTGGAAATCGGCGATGCCGAGCTGGTGGGCATCCAGAAGAAGAT
CATTCTGCACGCACGCCGCCACAACAAAGCGGTGATCGTCGCGACCCAGATGATGGAGTCGATGATCCAGAACCCGATGC
CGACCCGCGCCGAAGTGTCCGACGTAGCCAACGCCGTACTGGACTACACCGACGCTGTGATGCTCTCGGCCGAAAGCGCC
GCCGGCCTCTACCCGCTCGAAGCGGTGCAGGCCATGGCACGCATCTGCATCGGCGCTGAAAAGCACCCGACCAGCAAGAC
TTCCAGCCACCGCATCGGCAAGACCTTCGAGCGTTGCGACGAGAGCATCGCCCTGGCGACGATGTACACCGCCAACCACT
TCCCGGGCGTGAAGGCGATCATCGCCCTGACCGAAAGTGGCTACACGCCGCTGATCATGTCGCGCATCCGCTCCTCGGTG
CCGATCTACGCGTTCTCCCCGCACCGCGAAACCCAGGCGCGCGCGTCGATGTTCCGTGGTGTCTACACCGTGCCGTTCGA
CCCGGCCGCCCTGCAACCGGGCGAAGTCAGCCAGGCGGCGGTGGATGAACTGGTCAAGCGTGGCGTGGTGCAGACCGGTG
ACTGGGTCATCCTGACCAAGGGCGACAGCTACCACACCATCGGCGGCACCAACGGGATGAAAATCCTGCATGTTGGCGAC
CCGATGGTCTGA

Protein sequence :
MSVRRTKIVATLGPASNSPEVLEQLILAGLDVARLNFSHGTPDEHKARAKLVRDLAAKHGRFVALLGDLQGPKIRIAKFA
NKRIELKIGDTFTFSTSHPLTEGNQQVVGIDYPDLVKDCGVGDELLLDDGRVVMRVETATATELHCVVTIGGPLSDHKGI
NRRGGGLTAPALTEKDKADIKLAAEMEVDYLAVSFPRDAADMEYARQLRDEAGGTAWLVAKIERAEAVADDETLDGLIKA
SDAVMVARGDLGVEIGDAELVGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESA
AGLYPLEAVQAMARICIGAEKHPTSKTSSHRIGKTFERCDESIALATMYTANHFPGVKAIIALTESGYTPLIMSRIRSSV
PIYAFSPHRETQARASMFRGVYTVPFDPAALQPGEVSQAAVDELVKRGVVQTGDWVILTKGDSYHTIGGTNGMKILHVGD
PMV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 2e-60 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 2e-60 45
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 2e-60 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-59 45
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-77 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSF113_4655 YP_005210039.1 Pyruvate kinase VFG0479 Protein 1e-60 45